Solanum lycopersicum (tomato): 101249677
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Entry
101249677 CDS
T02665
Name
(RefSeq) sister chromatid cohesion protein SCC4 isoform X1
KO
K11266
MAternally affected uncoordination
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sly03036
]
101249677
Chromosome and associated proteins [BR:
sly03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
101249677
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cohesin_load
TPR_12
TPR_MalT
DUF4322
Motif
Other DBs
NCBI-GeneID:
101249677
NCBI-ProteinID:
XP_004247014
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Position
9:complement(36532107..36573195)
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AA seq
719 aa
AA seq
DB search
MEAVAEGLWGLADYEEKKGEIGKAVKCLEAICQSQVSFLPIIEIKTRLRIATLLLNHSNN
VNHAKSHLERSQLLLKSIPSFFELKCRAYSLLSQCYQLVGAIPSQKQILNKALELISTSE
DGFSGRLWYCNFNSQLANALTIEGDHHGSISALDDGLMCATQMCYPELQMFFATSILHVH
LMQWENESSVRDALNRCDVIWESIELEKRQQCLGLLFYNELLHVFYLLRICDYKNAGQHV
DKLDAAMKSDLQRRQQINELSKELDAVNESLSRSDLNYRDRSALSAKRAYLEEQLSNLTG
NDKEFSEPIYFGSARRTWEDKLGLAPPPVDGEWLPKGAIYALIDLTVAIFNRPKGLFKEC
LKRIQSGLQTVQEELKKYGILDGMREVDLQHSAIWIASIYLMLLMHFLENKVAVDLTRSE
FVEAQEALVQMRSWYFRFPTILQACECVIEMLRGQYAHCVGCYDEANYHFLEASRLSENK
SMQAMCFVYAAISYICMGDAESSAKALDLIGPVLGVMDSFTGVREKTSVLLAHGFLLMRQ
QNLQEARNRLAFGLQTTHNTLGNLQLVSQYLTVLGNLGLALRDTVQAREILRSSLTLAKK
LNDIPTQIWVLSNLTAMYQQLGEKGSEMENLDYQTKKVEDLQKRISTACLSSHHVELIAK
VKAEAYQLSETDIKRAISGPSMRVDLDIPESIGLSVTSPMASSSRLMDFDMGRLRKRKA
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggaagcagtggcggagggactttggggactggcagattatgaggagaagaagggagaa
atcggaaaagctgtgaaatgcttggaagctatatgtcaaagccaagtttctttccttcct
attatcgagattaaaacacgcctccgcattgctactctccttctcaaccactccaataat
gtcaaccatgccaaatcccatctcgaacgttctcaattgctgttgaagtccattccctca
ttctttgagctcaaatgcagagcatatagcttgttgagccagtgttaccagctagtcggg
gctattccttcacaaaagcagatactgaacaaggctttagaacttatttcgacttctgaa
gatgggttttccgggaggttatggtactgcaacttcaattctcaactagcaaatgctcta
acaattgaaggagatcatcatggttcaatttccgcactggatgatggcctaatgtgtgca
actcaaatgtgctatccggagttacagatgttttttgcaacttcgatcttgcatgtgcac
ctcatgcaatgggagaatgaaagttccgttcgagatgctctcaacagatgcgatgtaata
tgggaatctattgaattggaaaaaagacagcaatgccttggtttactattttacaacgag
ctgttgcatgtattttatctacttcggatatgcgactacaagaatgctggtcaacatgtt
gacaaattggatgctgccatgaagtctgatttacagaggaggcaacagatcaatgaattg
agtaaggagcttgatgcagtgaatgaaagtctctctcgttctgatttaaattacagagac
agatctgccctttctgcaaaacgagcttaccttgaggagcaacttagtaacttaactgga
aatgacaaagaattttctgaaccaatatactttggaagtgcaagacgaacttgggaagac
aagctgggattggcaccacctcctgttgatggagagtggctacctaaaggtgctatttat
gcattgatagaccttacagtagccatttttaaccgccccaaaggactttttaaggagtgc
ttgaagaggatccagtctggcctgcaaactgttcaagaggagctgaaaaagtatgggatt
cttgatggaatgagagaagtggatttgcaacactctgctatttggattgccagtatctat
ttgatgctccttatgcactttcttgaaaacaaagtagcagttgatcttacgcgttctgaa
tttgttgaagcgcaagaggcattggtgcagatgagaagttggtattttcgctttccaaca
attttacaagcttgtgagtgtgttattgaaatgcttcgaggacagtatgcacattgtgtc
ggctgctacgatgaagcaaattatcatttccttgaagcttcaaggctaagtgagaacaaa
tcaatgcaagccatgtgctttgtttatgcagcaatctcttacatctgcatgggagatgct
gaatcctcagcaaaggcccttgatctgatcggaccagttttaggagtgatggattctttc
acgggagtgcgagagaaaacgagtgtcctccttgctcatggatttctactgatgaggcag
caaaatctacaagaagcaagaaatcgactagcgtttggcttgcagacaacacataatact
ttggggaatctgcaacttgtttcacaatatttgactgtattggggaatctaggacttgcc
ctccgcgacactgtacaagctagggagatcttgaggtcctctcttacattagctaagaag
cttaatgatattccaactcagatctgggtattatcgaatttgacagctatgtaccagcaa
ctgggtgaaaaagggagtgaaatggagaatcttgattaccaaacaaagaaagtagaggat
ctgcaaaaaaggatttctactgcatgtttgtccagtcaccatgttgaactgattgccaaa
gtgaaagctgaagcctatcaattgagtgagactgacattaaacgagcaatctctggccct
tctatgagagttgatctggacattcctgaatccattggtctgtcagtaacttctcccatg
gcgtcctcatcaaggcttatggattttgatatgggaagactgcgaaagagaaaagcttaa
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