Solanum lycopersicum (tomato): 101249735
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Entry
101249735 CDS
T02665
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly00040
Pentose and glucuronate interconversions
sly01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101249735
Enzymes [BR:
sly01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
101249735
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Gene cluster
GFIT
Motif
Pfam:
Pec_lyase_N
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
101249735
NCBI-ProteinID:
XP_019070089
UniProt:
A0A3Q7H0W8
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All DBs
Position
6:46094649..46096712
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AA seq
435 aa
AA seq
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MVTLINRSSFFVILCTLFFSIEANIGEFDEVWRTRATQANKNAKESYNPNPEKVAANFNK
HVHRSEEGSNSTRRDLHKYNGPCVATNPIDRCWRCDPHWAKNRQKLADCVLGFGHHTTGG
KGGKIYEVTDPGDTDMVNPKQGTLRHAVIQPGPLWIIFAHHMVIKLNQELIMTGDKTIDA
RGQQVHITGGASLMLQYINNVIIHGLHIHDIKAGNGGLIRDSINHYGFRTKSDGDGISIY
GSTNIWIDHVSMSNCDDGLIDAVQASTAITISNCHFTHHNDVMLFGASDSFKQDEILQIT
LAFNHFGQGLIQRMPRVRWGFVHAVNNDYTHWLMYAVGGSQQPTILSQGNRFIAPPNPNA
KEVTKREYSPESVWKNWVWRSQGDLMMNGAFFVESGDPNHKFTTGPDMIHPRAGSDAGRL
TRFSGSLNCIEGKPC
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggtaactctcataaataggtcgagtttctttgtaattttgtgcacactattttttagc
attgaggctaatattggagagtttgatgaggtgtggaggactcgagccacccaagcaaat
aaaaatgctaaagaatcctataatcctaatcctgaaaaagttgcagctaatttcaacaaa
catgttcacaggtcggaagaaggtagcaatagcacaagaagggacttgcacaagtacaat
ggtccatgcgtggctacaaaccctattgatcgttgctggagatgtgacccacattgggct
aaaaatcgccagaagctagcagattgtgttctaggatttggccatcatacgactggtggc
aaaggtggcaaaatctacgaagtaactgaccctggggacaccgatatggtgaatcctaag
caagggacactgcgccatgcagtcattcagccagggccactatggatcatatttgcacat
cacatggtcattaagctaaaccaagaacttattatgacaggcgacaagacaattgatgcc
agaggacaacaagtgcatattactggtggtgctagtttgatgttacagtacataaacaat
gtgattattcatggtcttcatatccatgatataaaggctggtaatggtggactaattaga
gactcgatcaatcattacggttttcgaacaaaaagtgatggtgatggtatttcaatctat
ggatcaacaaacatttggattgatcatgtttccatgtctaattgtgacgatggactcatt
gatgccgtgcaggcttcaactgctattaccatttccaactgccatttcacccatcataat
gacgttatgttgtttggggcaagtgacagcttcaaacaggacgaaatcctacaaataaca
cttgcttttaatcactttggccaagggctgatccagaggatgccaagagtgagatgggga
tttgttcatgctgtcaacaatgactatactcactggctaatgtatgccgttggtggtagt
caacaacctaccatcctcagccagggcaatcgtttcatcgccccgcctaaccctaatgct
aaagaggtgaccaaaagggaatattcacctgagagtgtgtggaagaattgggtgtggaga
tcacagggagatctgatgatgaacggagccttcttcgtggaatctggagatcccaatcat
aaattcacgacgggtcctgatatgatccaccccagggcaggatcagacgcaggcaggcta
acaagattttcaggctctttgaactgcattgaggggaagccttgttag
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