KEGG   Solanum lycopersicum (tomato): 101249921
Entry
101249921         CDS       T02665                                 
Name
(RefSeq) DNA-directed RNA polymerases II and IV subunit 5A
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly03020  RNA polymerase
sly03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sly00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    101249921
  09124 Replication and repair
   03420 Nucleotide excision repair
    101249921
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sly03021]
    101249921
   03400 DNA repair and recombination proteins [BR:sly03400]
    101249921
Transcription machinery [BR:sly03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     101249921
  RNA polymerase III system
   RNA polymerase III
     101249921
  RNA polymerase I system
   RNA polymerase I
     101249921
DNA repair and recombination proteins [BR:sly03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      101249921
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N OB_RNR_1st NA-iREase1 DNA_pol3_alpha
Other DBs
NCBI-GeneID: 101249921
NCBI-ProteinID: XP_004239999
UniProt: A0A3Q7GL64
LinkDB
Position
5:65429577..65434438
AA seq 206 aa
MALSEEELSKLFRVRKTLMEMLSDRGYLVGDFEINMSKHQFLQKYGENMKREDLVIQKAK
RNNSSDQIYVFFPEEPKVGVKTMKTYTERMKKEDVFQAILIVQQNLTPFARTCISEISTK
FHLEVFQEAEMLVNIKNHVLIPEHQLLSPEEKKTLLERYTVKETQLPRIQITDPIARYYG
LKRGQVVKIIRPSETAGRYITYRYVV
NT seq 621 nt   +upstreamnt  +downstreamnt
atggctctatcagaggaggaactctcaaaactttttagagttcgtaagacactgatggaa
atgttgtccgataggggctatcttgttggagattttgagataaatatgtcaaaacatcag
ttccttcagaagtatggtgagaacatgaagagagaagaccttgtaattcaaaaagccaaa
cgtaacaacagttctgatcagatatatgtcttctttccagaggagccaaaggttggtgtt
aagacaatgaaaacttatacagagcgcatgaaaaaagaagatgtgttccaagcaattctg
attgtacaacaaaatctgactccctttgctcgtacctgcataagtgaaatatctacaaag
ttccacttggaggtttttcaggaggcagaaatgttggtaaacataaaaaatcatgttcta
attcctgagcaccagctactttctcctgaagaaaagaagaccttgttggaaagatacact
gtgaaagaaacacagcttcctcggattcagatcactgacccaattgctagatactacggg
ctaaaacgtggccaggtcgtgaaaattattagaccaagtgagactgcaggccgttatatt
acttatcgttatgtggtttga

DBGET integrated database retrieval system