Solanum lycopersicum (tomato): 101250028
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Entry
101250028 CDS
T02665
Name
(RefSeq) nuclear transport factor 2 isoform X1
KO
K24983
Ras GTPase-activating protein-binding protein 2
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sly03019
]
101250028
Messenger RNA biogenesis [BR:
sly03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
101250028
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Gene cluster
GFIT
Motif
Pfam:
NTF2
RRM_1
NXF_NTF2
Motif
Other DBs
NCBI-GeneID:
101250028
NCBI-ProteinID:
XP_004242411
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Position
6:51163591..51168104
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AA seq
477 aa
AA seq
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MAAEAAVAVAAVAPVSAQVVANAFVQQYYHILHHSPGLVFRFYQDISKLGRPEEDGSMGI
TTTMQAINDKILSLNYGDLRAEIKSVDAQESFNGGVHVLVTGYLTGKDNLVRNFCQTFFL
APQDRGYFVLNDMFRYVETASQHDTVQVPVTDAVAPVTPEQIVADPPTAPQNHIPEQSTP
PAEEADVGEVYNPSENGDVLIVEEEVPVSEVVHEVQDGSEVVAESDNKTGEVPKKSYASI
VMHLKESAATFSPPPAPAARKPMTKSVVQVNQPAATTTDGPYSSSETIDNINDTEAADGY
SIYIKGLPMSATVALLADEFKKFGPIKNGGIQVRSNRQQGFCFGFVEFEVESAVQKAIEA
SPVLIGDRQAVVEEKRSTNSRLNARGGGRFQSGRGGGFRNDVGGRGRGNYLGGRGYGRDD
FHGRNEFNNRGGNRGGSSNRGGEGYRRADNTGGRMSRGGGMSNGTAKGPAPRYSATA
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggaagcagcagtagcagtagcggcagtagcaccagtttctgctcaagttgtt
gcgaatgcttttgtgcagcaatactatcatatattgcatcattcgccggggcttgtattc
aggttttaccaggatataagcaagcttggacgtcctgaagaggatggatccatgggtatc
actacgacaatgcaagcaataaatgataagatactctcactcaactatggagatctcaga
gcagagatcaagtctgtggatgcccaagaatcctttaatggcggggtgcatgtccttgta
actggatatttgactgggaaagacaacttggtccggaatttctgtcaaactttcttccta
gcaccacaagatagggggtactttgtcttgaatgatatgtttcgatatgtagagactgcc
agtcagcatgatacagtccaggttccagtaactgatgctgtggctcctgtcacaccagag
caaattgttgcagatccacctacagcaccacagaatcacattcctgagcaaagcactcca
ccagcagaggaagctgacgtgggagaagtttacaacccatctgagaatggtgatgtgctt
attgttgaggaggaagtgcctgtgtctgaggtcgtccatgaagtccaagatggctctgaa
gtggtagcggaatctgacaacaaaactggggaagttcctaagaagtcatatgcttcaatt
gtcatgcatctcaaggaaagtgctgcaaccttctcccctcctccagcacctgctgctagg
aagcctatgacaaagagtgttgtgcaagtgaatcagcctgctgccacaacaactgatggc
ccatattccagctcagagaccattgataacataaatgacacagaagcagctgatggctac
tcaatctatataaaaggcctgcctatgagtgcaactgtggcattacttgcggatgagttc
aagaagtttgggccaataaaaaatggaggaattcaagtgagaagtaacaggcaacaggga
ttttgttttggattcgtggaatttgaagtggaaagtgctgtgcaaaaagcaatcgaggct
tctccagttctcattggtgatcggcaagcagtggtcgaggaaaagaggtctaccaattct
cgacttaatgccagaggtggtggtaggtttcaatctggaaggggcggtggattcaggaac
gatgttggaggaagagggcgaggaaactatttaggtggcaggggttatggtcgagatgat
ttccatggaagaaatgagttcaataacaggggtgggaatcgtgggggttcatcaaaccgt
ggaggtgaaggatatcggcgagctgacaatacaggtgggcgaatgagtcgtggtggtgga
atgtctaatggaacagccaaaggcccggctcctcgctattctgctacagcttga
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