Solanum lycopersicum (tomato): 101250310
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Entry
101250310 CDS
T02665
Name
(RefSeq) U-box domain-containing protein 13 isoform X1
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
101250310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sly04121
]
101250310
Enzymes [BR:
sly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101250310
Ubiquitin system [BR:
sly04121
]
Ubiquitin ligases (E3)
U-box type E3
101250310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
Neurochondrin
MLKL_N
Arm_2
HEAT_2
HEAT_EZ
zf-Nse
zf-RING_UBOX
zf-C3HC4_4
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
101250310
NCBI-ProteinID:
XP_004241233
UniProt:
A0A3Q7H3P9
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All DBs
Position
6:complement(49717804..49723027)
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AA seq
661 aa
AA seq
DB search
MEEGRGVLVEKLIEVVNEIAAISDYRTSVKKEYCNLGRRLKLLIPMFEEIRDIKEPVPEN
SMIALVSLKEALESTKELLKFGSQGSKIYLVLEREQIMNKFHQVTTQLEQALGGVHYQEL
DISDEVKEQVELVLSQFQRAKGRVDTPDAELHEDLLSLYSQSNDPAIDPAVLRKLVKKLQ
LTGLYDLTQESCALHDMVTATGEDPEERIEKMSLVLRKIKGFVLTETPEIDSSSREKSST
CSGQVSIETTHKAPVIPDDFRCPISLELMKDPVIVSSGQTYERSSIEKWLEAGHSTCPKT
QQVLTSNVITPNYVLRSLIAQWCEMNGVESPKRPGSSPNKSASACTPAEHSTIENLLRKL
TSGSPEDRLSATGEIRLLAKRNADNRVAIAEAGAIPLLVDLLSTPDSRIQEHAVTALLNL
SICEDNKRSIVTSGAVPGIVHVLKKGSMEARENAAAALFSLSVIDENKVIIGTFGAIPPL
VTLLSDGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVVTLMGLLTEPQGSMIDEALAIL
AILSSHPEGKTTIGAAGAVPVLVNVITSGSPRNKENAAAVLVHLCSGDQHYLVDVQELGI
MGPLLDLVQNGTERGRRKATQLLERINRYAEQQKQAQTEPEAPIHNQLSESPPSSTNVLE
C
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaggaagaggagtgttagtggagaagctgattgaggtagttaacgaaatagca
gccatttcagattacagaacttcggtgaagaaagagtattgcaatctaggtaggaggctt
aaattattgattccaatgttcgaagagattcgggatatcaaagaaccagttcctgaaaac
tcaatgatagctttggtttcattgaaagaagctcttgaatcaaccaaggaattgctcaaa
ttcggcagccagggaagcaagatttatctcgtcttagaaagggagcagataatgaataaa
tttcaccaagtgacaacccagctggaacaagctttgggtggagttcattatcaagagctt
gacatatctgatgaagttaaagagcaggtagagcttgtcctttctcagttccaaagagcc
aaaggaagggttgatacacctgatgctgaactccatgaggatctattgtccctttacagc
cagagtaatgatcctgctatagatccagctgtcctaaggaaattggttaagaagttacag
ctgactggattatacgatctcacacaagaatcatgtgctttgcatgatatggtcactgct
actggtgaagatccagaggagagaatcgagaagatgtcacttgtactgaggaaaattaag
ggctttgtgcttactgagactccggagattgattcttcttcgagggagaagtcttcaact
tgtagcggacaagtttctatcgagacaactcataaggccccagttataccagatgatttt
cggtgtcctatatccctggaattgatgaaagatcctgtcattgtttcatccggccagact
tacgagcgttcttcaattgagaagtggctggaagcagggcatagcacttgtcccaagaca
caacaagtcctcactagcaatgttatcacaccaaactatgtgttgcggagcctcatagca
cagtggtgtgaaatgaatggagttgaatcacccaaacgaccaggtagttcacccaataaa
tcagcatccgcatgcacgcctgctgagcactcgacgatagaaaatctcctgagaaagctc
acatctggcagccctgaagatcgtctctcagccacaggtgaaatccgccttcttgctaaa
cgcaatgctgataatcgtgttgcaatagctgaagcaggtgctattcctctgcttgttgac
cttctttccacacccgattctcggatccaagagcatgctgttacagcactacttaacctt
tctatctgtgaggataacaaacggagcattgtaacatcaggggcagtgcctggtatcgtc
catgttcttaagaaggggagcatggaagcacgtgaaaatgcagcggctgcactatttagc
ctttcagttatagatgagaataaggtcataattggtacttttggagcaatacctccactt
gtaacattattaagtgatggcacccagagagggaagaaagacgctgctaccgcacttttc
aatctgtgcatttatcaagggaacaagggcaaggcagtaagggctggagttgtggtcact
ctgatggggctgcttacggaacctcaaggtagtatgatcgacgaagcacttgccatttta
gctatattgtctagtcatccagaagggaagacaaccattggagctgcaggggcagttcct
gttttggttaatgtgatcacaagtggttctcccagaaacaaagaaaatgcagctgcagtt
ttggtacacctttgctctggggaccaacattatctagtggatgttcaggagctaggaata
atgggaccattgctggatttagtacaaaatggtactgaaaggggtagacgaaaggcaacc
cagttgcttgaacgaataaatagatatgctgaacagcaaaaacaggcccagacagaaccc
gaggctccgattcataaccagctttcagagtcaccaccatcatcgacaaatgtcctggaa
tgctga
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