Solanum lycopersicum (tomato): 101250383
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Entry
101250383 CDS
T02665
Name
(RefSeq) zinc finger protein SHOOT GRAVITROPISM 5
KO
K25871
zinc finger protein IDD14/15/16
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sly03000
]
101250383
Transcription factors [BR:
sly03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
101250383
BRITE hierarchy
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GFIT
Motif
Pfam:
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
C2CH-4th_BIRD-IDD
DUF3386
CpXC
Porin_3
zf-H2C2_2
zf-C2H2
Motif
Other DBs
NCBI-GeneID:
101250383
NCBI-ProteinID:
XP_019068541
UniProt:
A0A3Q7FN54
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All DBs
Position
3:complement(57239353..57242071)
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AA seq
364 aa
AA seq
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MHRRRHKVPWKLLKRETPIVRKRVFVCPEPTCLHHDPCHALGDLVGIKKHFRRKHSNHKQ
WVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACSMGRLRSESQS
LHPPCLSRTASSTPSPSSDTNLSTTPWSSTLLKKLSSAAAAANPNMVKSCTNKHNLELQL
LTTTTSSSSPAFDVSVSSKPNEDHSAHNLQLSIGSSDFNESSENANEKRSSDALRLKDEA
TEQLRVAISEKAYAEEARQQAKRQIELAEQEFANAKRIRQQAQAELDKANALKEHAIKQI
NSTLSQITCHSCKQKFQSTTRVSIADENNSLALSYISSGLSEGHHHEVAANNINQNEHLK
LSQL
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgcacagaagaaggcataaagttccatggaagcttcttaaaagagaaaccccaattgta
agaaaacgtgttttcgtttgcccagagccaacttgtctccatcatgatccttgtcatgcc
ttgggagatctcgtcggtattaaaaaacatttccgtagaaaacacagtaatcacaagcaa
tgggtttgtgaaaaatgctctaaaggctatgcagttcaatcggattacaaagctcatctc
aaaacttgcggaactcgtggacattcttgtgattgtggacgcgttttttcaagagtggaa
agcttcattgagcatcaagacgcttgtagcatgggcagactccgatctgaatcacaatct
ctacatcctccttgcctttctcgcactgcttcaagtactcctagcccgtctagcgacacg
aatctcagcacaacaccatggtctagtacattgctaaaaaaactatcatctgctgcagct
gcggctaatcccaacatggtaaaaagttgtacaaacaaacacaatttagaactccagctc
ttgactactactacatcatcatctagcccagcttttgacgtatccgtatcatctaaacca
aacgaagatcactcagctcacaatctacaactctccattggctcctcagacttcaacgag
tcatcagaaaacgcgaacgagaagcgtagttcggatgccttgaggctgaaagatgaagca
acggagcagctaagggtagcgatctcagaaaaggcgtatgccgaagaggctaggcagcaa
gcgaagcggcagatcgagctggctgagcaggaatttgcaaatgctaagagaattagacaa
caagcacaagcggagttggacaaggctaatgctttgaaagaacatgccatcaagcaaatc
aattctacactttcacaaatcacttgtcattcttgcaaacagaaattccaatcaactacc
agagttagtattgctgatgaaaataactcattggcattgagttatatttcttcgggttta
tcagaaggtcatcatcatgaagttgccgccaacaatatcaatcaaaacgaacatctcaaa
ctttctcaactttag
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