Solanum lycopersicum (tomato): 101250421
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Entry
101250421 CDS
T02665
Symbol
ABCE1
Name
(RefSeq) ABC transporter E family member 1
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sly03009
]
101250421 (ABCE1)
Ribosome biogenesis [BR:
sly03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
101250421 (ABCE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
SMC_N
AAA_21
Fer4
AAA_15
AAA_22
AAA
Fer4_6
Rad17
AAA_16
RsgA_GTPase
AAA_29
AAA_23
NACHT
nSTAND3
DUF5906
Fer4_2
NPHP3_N
AAA_33
Fer4_9
TsaE
Fer4_10
Fer4_21
AAA_5
SRP54
AAA_24
Fer4_4
Thymidylate_kin
ORC-CDC6-like
Fer4_16
Fer4_7
AAA_7
Fer4_8
Fer4_17
DLIC
Motif
Other DBs
NCBI-GeneID:
101250421
NCBI-ProteinID:
NP_001333792
UniProt:
A0A3Q7H7H5
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All DBs
Position
7:4773503..4780285
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AA seq
605 aa
AA seq
DB search
MSDRLTRIAIVSDDKCKPKKCRQECKKSCPVVKTGKLCIEVTVGSKIAFISEELCIGCGI
CVKKCPFEAIQIINLPKDLDKDTTHRYGPNTFKLHRLPVPRPGQVLGLVGTNGIGKSTAL
KVLAGKLKPNLGRFTNPPDWQEILTHFRGSELQNYFTRILEDNLKAIIKPQYVDHIPKAV
QGNVGQVLDQKDERDVKEKLCVDLELNQVLDRNVGDLSGGELQRFAIAVVAIQNAEIYMF
DEPSSYLDVKQRLKAAQVVRSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGVVT
LPFSVREGINIFLAGFVPTENLRFRDESLTFKVAETPQEAAEEIESYARYRYPTMTKTQG
NFKLKVSEGEFTDSQIVVMLGENGTGKTTFIRMLAGLLKPDVVEGSDIEMPEFNVSYKPQ
KISPKFQSTVRHLLHQKIRDSYQHPQFCSDVMKPLQIEQLMDQEVVNLSGGELQRVALAL
CLGKPADIYLIDEPSAYLDSEQRIVASKVIKRFILHAKKTAFVVEHDFIMATYLADRVIV
YEGTPSIDCVANAPQSLLTGMNLFLSHLNITFRRDPTNYRPRINKLESTKDREQKSAGSY
YYLDD
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacagattgacacgtatcgccatcgttagcgacgacaagtgcaagccgaagaag
tgccgccaagaatgcaagaagagctgtccagttgttaaaactggtaagttatgtatagag
gtcactgtaggctcgaagattgctttcatctcagaggagctgtgtattggatgtggtatt
tgtgtaaagaaatgcccatttgaagcaattcagatcatcaatctgccaaaagatctagac
aaggatacaacccatcgttatggtcccaacactttcaaattgcacaggttacctgtccct
aggccaggacaggttcttggtctggttggcacaaatggtattggaaagtcaactgccctg
aaagttttggctggaaaattgaaaccaaacttgggacgcttcactaaccctcctgattgg
caagagatcttgactcactttcgaggatccgaattgcagaattacttcactcgcattctg
gaagataacttgaaggcaattatcaagcctcagtatgttgaccatattccaaaggcagtt
caaggaaatgtcggacaagtgcttgaccaaaaagatgagagagacgtgaaggaaaaactc
tgtgttgatctagagctgaatcaggttttggatcgtaatgtaggtgatctatctggtgga
gagcttcagaggtttgctattgctgttgttgccatacaaaatgcagagatatacatgttt
gatgagccttcgagttaccttgatgtgaagcaaaggcttaaagctgcccaagttgtcaga
tccttgcttcggccaaatagctatgtcattgttgtggagcatgatcttagtgtgcttgat
tatttgtcggatttcatttgctgcttatatggaaagcccggtgcgtacggagttgtgacc
ctacccttctcagtcagggaaggaattaatatatttttggctgggtttgtgcctacagaa
aatctacgttttcgtgacgagtctcttacttttaaggttgctgagaccccacaagaggct
gctgaggaaattgaatcatatgcacgttacagatatcctaccatgactaagactcaaggt
aatttcaagcttaaggtttctgagggtgaatttactgattcacagattgttgtgatgctt
ggtgagaatgggactgggaagacaaccttcattcgtatgctggctggtctattaaagcct
gacgtggtggaaggatctgatattgagatgccagagttcaatgtttcatacaagccccag
aaaattagtccaaaatttcaatccactgtgagacatttgctacatcaaaaaatacgtgat
tcttatcaacacccccagttttgttcagatgtgatgaagcctctccaaattgagcaattg
atggaccaagaagttgtgaatctttctggtggtgagttgcaaagagttgccttagccctg
tgccttggaaagcccgctgatatatatctgatcgatgagccaagtgcctatcttgattct
gagcagcgtattgtagcttctaaagtcatcaagagattcattcttcacgcgaagaagact
gcatttgttgtagagcatgacttcataatggcaacttacctggcagatagagtcattgta
tatgaggggacgccttccatagattgtgttgcaaatgcacctcaatcactgttgactgga
atgaacttatttttatcacatctgaacattacgtttcgaagggacccaactaattaccgt
ccaaggatcaacaaactagaatcaaccaaggatagggagcagaagtcagctggatcttac
tattatttggatgattaa
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