Solanum lycopersicum (tomato): 101250424
Help
Entry
101250424 CDS
T02665
Name
(RefSeq) ATP-dependent DNA helicase Q-like 3
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03440
Homologous recombination
sly03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101250424
03460 Fanconi anemia pathway
101250424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sly03032
]
101250424
03400 DNA repair and recombination proteins [BR:
sly03400
]
101250424
Enzymes [BR:
sly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
101250424
DNA replication proteins [BR:
sly03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
101250424
DNA repair and recombination proteins [BR:
sly03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
101250424
Bloom's syndrome complex (BTR)
101250424
FA (Fanconi anemia) pathway
101250424
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-GeneID:
101250424
NCBI-ProteinID:
XP_010323995
LinkDB
All DBs
Position
7:complement(56947061..56962263)
Genome browser
AA seq
730 aa
AA seq
DB search
MNKSLLPLQSNCGREKNVIGKEALVKLLRWHFGHSDFRGKQLEAIEAVLSGRDCFCLMPT
GGGKSMCYQVPALTKPGIVLVVSPLIALMENQVSTLKEKRIPAEFLSSTQTVLVKNKIYE
DIESGKPAVRLLYVTPELIATSGFMSKMTKIHARGLLNLIAVDEAHCISSWGHDFRPSYR
KLSSLRSHFPNVPVLALTATAVPKVQKDVIESLNLQNPLVLKSSFNRPNIYYEVRYKDLL
DDPYADVCKLLKSCGNVCAIIYCLERTMCDDLAIHITSSGISCAAYHAGLNNKMRSSVLD
DWISSKTQVVVATVAFGMGIDRKDVRVVCHFNIPKSMEGFYQESGRAGRDQLPSRSVLYY
GVDDRRKMEFILNNTKRSKDESSSLQDKSSKKSLDDFKQMVEYCEGSGCRRKMILENFGE
MVPDSLCEKSCDVCKHPNLVTSNLEQLKTATAFRQRGGSSRIYMTSGSSLNAGEQLSEFW
NRDDEASGSEEDISESDDALDAAKNVASSKTSAKLRLQDKMDLLQRAEENYYQNKSHDKQ
VNKLDKNAIPEKLREAGKQRLLNSIKQNQQMVNDSRIDIDKSVVFLENECYKKYGKSGKS
FYLSQMASTARWLSTAGPMELVNKLSSSSTATPPENVTSIADCSPASSNISVPISARAND
EEVHGNAGSQDPIRSPASPLHGSASAKLPPILSFSQFINSGKAKGNLASASKRQSPDRGK
NKLEKRMRFQ
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatcactattacccttgcaaagtaattgtggacgtgagaagaatgtgattggg
aaggaagctttagtcaaactattgagatggcattttggacattctgatttcagggggaag
caattggaagctattgaagctgtgttatcaggaagggattgcttttgcctcatgccaact
ggtggagggaaatccatgtgctatcaggtccccgctttgacaaaaccaggaattgtgctt
gttgttagtcctttgatagctctcatggaaaatcaagtttcaacattgaaagaaaaaagg
attcctgctgaatttctttcttcaacccagacagttctagtgaaaaacaagatatacgag
gacatcgaatctgggaagccagctgtaaggttactgtacgtgacaccagaattaattgcg
acatctggatttatgtcaaaaatgacaaagattcatgctagaggattgttaaatctcatt
gccgttgatgaggcacattgcatctcttcatggggccatgacttcaggcctagctatcgg
aagctttcttcactgagaagtcatttcccaaatgtaccagtattggctttgacagcaact
gctgtccctaaagttcagaaagatgtcatagagtcattgaatttgcaaaaccctctagtc
ctgaaatcatcgttcaaccggccaaatatctattatgaagttcgctataaagaccttttg
gatgatccatatgctgacgtgtgtaaattactaaaatcttgtggaaatgtgtgcgctatt
atttattgcctggaacgtactatgtgtgatgatcttgcgatccatataaccagcagcggc
atttcttgtgctgcatatcatgctgggctgaacaataaaatgcggagctctgtcttggat
gactggatttcttcaaaaacacaagtggttgttgcaactgtagcttttgggatgggtata
gatagaaaggatgtcagagtggtctgtcacttcaatattcccaaatcaatggaaggcttc
tatcaagagtcaggtagagctggacgtgatcagttgccttccagaagtgtactgtattat
ggagtggatgaccgtaggaaaatggagtttattttaaacaatactaaaaggagtaaggat
gagtcctcaagcttgcaagataaatcttcgaagaagtccctggacgacttcaaacagatg
gttgagtattgtgaagggtctggttgtcgtaggaaaatgatacttgagaactttggagag
atggtacctgattctttatgtgaaaaatcatgtgatgtgtgcaagcatcctaatctagtt
acaagtaacttggagcaacttaaaactgcaactgcttttcggcagagaggtggatcttca
agaatatatatgaccagtggttcaagtcttaatgccggagaacaattgtcagaattctgg
aaccgtgatgatgaagcaagtggatcagaagaagatatatctgaatctgatgatgctctg
gatgctgcaaagaatgtcgcttcatcaaaaacatccgcaaagctcaggttgcaagataaa
atggatttgctgcagcgtgcagaagagaattattatcagaacaaaagccatgataagcag
gtcaataaacttgacaagaatgccatacctgaaaaactcagggaagcaggcaagcagaga
ttgctgaattcaataaagcaaaaccagcagatggtcaatgattcgaggattgacattgat
aaatccgtagttttccttgaaaatgaatgttataagaagtatggcaaaagtggaaagtct
ttctatttatcacaaatggcaagtacagctaggtggctttctacagcaggtccgatggaa
ttggtgaataagctcagcagttctagtactgctactcctcctgagaatgtaacatccata
gccgactgcagtccagcatcatcaaatatttcggtgcctatatcagcaagggctaatgac
gaagaagtccatggcaacgctggatcacaagatccaataagatcaccagcctcacccttg
catggatctgcaagtgcaaagttaccacccatcctgtctttctctcagtttatcaacagt
gggaaggcaaaggggaaccttgcatctgcatcaaagaggcaatcacccgatagaggtaaa
aataagttagagaagaggatgagatttcaatag
DBGET
integrated database retrieval system
