Solanum lycopersicum (tomato): 101250435
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Entry
101250435 CDS
T02665
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 2
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sly01009
]
101250435
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sly03021
]
101250435
Enzymes [BR:
sly01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
101250435
Protein phosphatases and associated proteins [BR:
sly01009
]
HAD phosphatases
Fcp/Scp phosphatases
101250435
Transcription machinery [BR:
sly03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
101250435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
dsrm
Ribosomal_S5
Motif
Other DBs
NCBI-GeneID:
101250435
NCBI-ProteinID:
XP_004246330
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All DBs
Position
9:complement(6589504..6600689)
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AA seq
808 aa
AA seq
DB search
MSRLGFKSLVFQGETCLGELDTIPVKDQNFQFPNNEIRIDHISTNSERVHPIAVLRTISS
PVRCKLEPNSNSAPTGSEKSPLITLHSSCYYDLKTAVVFLGEEEIHLVAMASKQKKFPCF
WCYSVPVGLYSACLQMLNMRCLSIVFDLDETLIVANTMKSFDDRIEALRGWLAREMDPIR
SSGMSAELRRYMEDRALLKQYLESDSVVDCGIVYRAQKEEVLPLSEGQEGVVRPVIRLGD
KNVVLTRINPENRDTSVLVRLRPAWEELRTYLTAKGRKRFEVYVCTMAERDYALEIWRLL
DPGSHLINANQLMDRVVCVRSGAKKSLLTVFRNGICHPKLAMVIDDRLKVWDDKDQPRVH
VVPAFAPYYAPLAEMANAVPVLCVARNVACDVRARFFKEFDEGLLRKICEIFYEDEAVNL
PSAPDVSNYLMSEDAGFASCGIPAPIPEGMYGPEVTQRLNQQEGKVNMNSAPVFMSNNPD
MKPGSSQLMVGIAANAPAQSVRPIQPSEKPSLLGAPFRRDNSFSEADGDGKRRHPILNPS
QDMRYRGSAEPPLLPRVPQKPPILPIPPHGGWLVEDDLNKGHMGGRSPGIFQESDASRYA
KQRGHQNFLSQGATNMMLPSYASAGKNGEVNFRHEMHRLIHQTEGRFSQHQSLFNNREPQ
LEAGRMNILPSLATGVLQEIGRLCNSKVEFRPVVSTSEELQFSVEVFFIGERVGVGMGKT
RKDAQQQAAENALRNMAGNYVSYITSHPLAVDKDFDKISVENENGFLWDTVNHVDEPSVD
DRLPQVNVSEVGVNGDASHDRSLNSLKT
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtttagggttcaaatccctggtgtttcaaggagaaacgtgtttgggagagctg
gataccatacctgtgaaggatcagaacttccaattcccaaacaacgagatacggattgat
catatctctacaaatagtgagcgagttcatcctattgctgttttgagaacgatttcatca
cctgttcgttgtaagcttgaaccgaactcgaattcagcgccaactggttccgagaagtct
ccgttgataactcttcattcctcgtgctactatgacctcaagacggcagtagtctttctg
ggggaagaagaaatacatttggtagcaatggcgagtaagcagaaaaagttcccctgtttt
tggtgctattcagtgcccgttggtctgtatagtgcttgtttgcagatgttgaatatgagg
tgtctatcaattgtttttgatctggatgagactttaattgttgcaaatacaatgaagtca
tttgatgatagaattgaggctttgcggggttggttagcacgagagatggatccaattcgg
tcgtctggaatgtccgcagagctgaggaggtatatggaggaccgtgcactgctgaagcag
tatttagagagtgattctgttgttgactgtgggattgtatatagagctcagaaagaggag
gtgctaccattatctgaagggcaggagggtgtagttcggccagtcataaggttgggggat
aagaatgttgtccttacacggattaatcccgagaatcgggataccagtgtgcttgttaga
ttacgtcctgcgtgggaggagttgagaacttatttgacggcgaaaggtcggaaaagattt
gaagtatatgtttgcaccatggcagagagagattatgccttggagatttggaggctactc
gacccagggtcacacctcattaatgccaatcaattgatggatcgtgttgtatgtgttaga
tcaggggccaagaagtctttacttactgtcttccgaaatggcatttgtcatccaaaattg
gcaatggttattgatgaccgactcaaagtgtgggatgataaagatcaacctcgtgttcat
gttgtccctgctttcgctccgtattatgctccactagcagagatggccaatgcagtaccg
gtcctgtgtgtggcaagaaatgttgcttgtgatgttagagctcgtttctttaaagagttt
gatgaaggcctactccgaaagatctgtgagattttctatgaagatgaggctgtaaattta
ccttctgcgcctgatgttagcaactacttaatgtccgaggatgctggttttgcgtcatgt
gggattcctgctcctattcctgagggaatgtacgggcctgaagttacacaaaggttgaat
caacaggagggaaaagttaatatgaactctgctcctgttttcatgagtaacaatcctgat
atgaagccaggaagctcccagcttatggttggaattgctgcaaatgcacctgctcaatca
gtgagaccaattcaaccttcagaaaaaccaagtttgctgggagctccatttagacgagat
aacagcttttctgaagctgatggtgatgggaagagaaggcaccccatattgaatcctagc
caggacatgaggtatcgtggttcagcagaacctcctttattacctagagtgcctcagaaa
ccacccatactgcccataccaccacatggtggatggttggtggaagatgacctaaataaa
ggacacatgggtggtcgatcacctggaatttttcaagaatctgatgcatcaaggtatgct
aaacagagaggtcatcagaattttctgagtcaaggtgcaacaaacatgatgttaccatca
tatgcatctgcagggaagaacggggaggtaaatttcaggcatgaaatgcatagacttatt
catcagacagagggtagattctctcaacatcagtcgttatttaacaacagagaacctcaa
ctagaagctgggagaatgaacatcttgccatctttagctactggagtgctgcaagaaatt
ggacggctatgcaactcaaaggttgagttcaggcctgtggtgagcaccagtgaggaattg
caattttcagttgaggtcttctttatcggtgagagagttggtgttgggatgggtaagact
aggaaggatgctcagcaacaggcagctgagaatgcacttcggaacatggctggtaattac
gtctcatacattacatctcaccctctagcagtggataaagactttgataagatttcggtg
gaaaatgaaaatgggttcttgtgggacactgtcaatcacgtggatgaaccttcagtcgac
gatagattacctcaagtaaatgtttcagaggtgggagttaatggtgatgcttctcatgac
cgatcacttaattctttgaaaacatga
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