Solanum lycopersicum (tomato): 101250576
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Entry
101250576 CDS
T02665
Name
(RefSeq) DNA gyrase subunit B, chloroplastic/mitochondrial isoform X1
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sly03032
]
101250576
03400 DNA repair and recombination proteins [BR:
sly03400
]
101250576
Enzymes [BR:
sly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
101250576
DNA replication proteins [BR:
sly03032
]
Prokaryotic type
DNA Topoisomerases
101250576
DNA repair and recombination proteins [BR:
sly03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
101250576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
TOPRIM_C
HATPase_c_3
GyrB_hook
Motif
Other DBs
NCBI-GeneID:
101250576
NCBI-ProteinID:
XP_004252016
UniProt:
A0A3Q7JUG1
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Position
12:15564416..15588394
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AA seq
729 aa
AA seq
DB search
MALLKPFPLQYSLRRMASRYLLHCHSHTLPFSSTFLSPPSIFLNTRVITRLRRVSDGIFI
RNVVSPRAFMSSSVTIEAFQENTKSKAYGSEQIQVLEGLDPVRKRPGMYIGSTGPRGLHH
LVYEILDNAVDEAQAGFATKIDVVLHADNSVGITDNGRGIPTELHPVTKKSSLETVLTVL
HAGGKFGGSSSGYSVSGGLHGVGLSVVNALSEALEVTIWRDGKEYQQKYSRGKPVTTLIC
QELPVEIKDWQGTSIRFWPDKEVFTTEIQFDYNTIAGRIRELAFLNPELTIVLKKDDIDP
EKIQHAEYFYAGGLVEYVKWLNADKKPLHDVLGFRKEADGITIDMALQWCSDAYSDTVLG
YANSIRTIDGGTHIDGVKAALTRTLNSLGKKSKTIKEKDINLSGEHVREGLTCVISVKVP
NPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLNALKAALAAKRA
RELVRQKSVLRSSSLPGKLADCSATNPEEAEIFIVEGDSAGGSAKQGRDRRFQAILPLRG
KILNIERKDEAAMYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRT
LLLTFFFRYQRALFEEGCIYVGVPPLYKVERGKQAYYCYDDVELKKVQRSFPSNASYNIQ
RFKGLGEMMPAQLWETTMNPETRLLKQLVVEDAAEANVVFSSLMGSKVDVRKQLIQHSAS
MINLEQLDI
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggctctgctaaaaccatttcctcttcaatactctcttcgtcgcatggcttctcgttat
cttcttcattgtcactctcatactcttcccttttcttcaacctttctttctccaccctct
attttcctcaacaccagggtgattactaggctgagaagggtgtcggatggcatttttatt
agaaacgtggtgtctccaagagcttttatgtcatcaagcgttactattgaggcttttcaa
gaaaatactaagtcaaaagcttatggttctgagcaaattcaggtattggaaggtctggat
cctgtcagaaaaagaccaggaatgtacataggaagcacaggccctcgtggtctccaccat
ttggtttatgaaattttggataatgccgttgatgaggcacaagcaggattcgcgacaaag
atagatgtggtcctccatgctgataactctgttggcatcactgacaatggccgtgggatt
ccaacagagttgcatccagtgacaaagaaatcttctcttgaaacagtcttgacggttttg
catgcaggtggtaaatttggaggctcaagtagtggctatagtgtgtctggtggattacat
ggtgtgggcttgtcagttgttaatgcattgtcagaggccctagaagttaccatatggcgt
gatggtaaagaatatcaacagaaatattcacgggggaagccagtaacaactttgatatgt
caggagctcccggtggaaattaaagattggcaagggacttccattcggttttggcctgat
aaagaagtattcacaactgaaatacaatttgactataataccatagctgggagaattagg
gagcttgctttcctcaatcccgagctcactattgttctcaagaaggacgacatagatccg
gaaaagatccaacatgctgagtacttttatgctggaggattggttgaatatgtgaaatgg
ctgaatgcagacaaaaaaccacttcatgatgtgttgggattcagaaaagaagcagatgga
atcacaattgatatggctcttcaatggtgctcagatgcttattcagacacagtgctaggt
tatgcaaacagcatacggacgattgatggtggcactcacatagatggtgtgaaagctgcc
ctaacaagaaccctcaacagtttgggaaagaagtcaaagacaatcaaggagaaggatata
aacttaagcggcgagcatgtaagagaggggttaacttgtgttatctctgttaaagttccg
aatccagaatttgaaggacaaactaagactaggctgggaaatcctgaggtaagaaaggtg
gtcgatcagtcagttcaagagtatctgactgagtatctggaattgcatccagatgtgcta
gattcaattctttccaagtcattaaatgctctaaaggcagctcttgcagcaaagagggct
cgggagttggtgagacagaaaagtgtcttaagatcatcctctcttccagggaagcttgct
gattgttcagccacaaatcctgaagaagctgaaattttcatcgttgagggtgattcagct
ggtggaagtgcaaaacaaggtcgtgatcggcgctttcaggctattcttcctttgagaggc
aaaattttgaatattgagagaaaggatgaagcagctatgtataaaaatgaagagattcaa
aatcttattcttggtttaggacttggagttaagggggaggattttaaaaaggaagctctc
cgttatcataagatcataattttaacagatgccgatgttgatggtgctcatattcgaaca
ttgttgttgacatttttctttagatatcagagagctctttttgaagaaggttgcatttat
gttggtgttccacctctctataaggttgaaaggggaaaacaagcatactactgctatgat
gatgtagaacttaaaaaggtccagcgttcctttccttcaaatgcatcatataacatacag
aggttcaaaggattgggagaaatgatgccagcacagttatgggaaacaacaatgaaccca
gagactaggctgttaaagcaattagtagtggaggatgcagctgaagcaaatgtcgtcttc
tcttcactaatgggatccaaggtggatgttagaaagcaacttatacaacattcagcgagc
atgatcaaccttgagcaactggatatatga
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