Solanum lycopersicum (tomato): 101250582
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Entry
101250582 CDS
T02665
Name
(RefSeq) uncharacterized protein isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
101250582
Enzymes [BR:
sly01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
101250582
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
EMC7_beta-sandw
CarboxypepD_reg
CarbopepD_reg_2
RhgB_N
CBM27
Motif
Other DBs
NCBI-GeneID:
101250582
NCBI-ProteinID:
XP_004252722
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Position
12:complement(65725028..65729617)
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AA seq
640 aa
AA seq
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MSSTGLLLNAQNDYVVINNGVVEITWTNPGGIIKGIKYKGIDNLLEEKNKDLNGGFWDLN
WSESSNTKTRGKFDTIQGTDLQVIVENEEQIELSFTRMWSSEVQGEQAPLYIDRRFVVFR
DVPGFYSYAIFEHTKDMPAFHLNTTRIAFMLNKEKFHYMVITDDRQRFMPSAEDRLPGRG
EPLAYPEAVLLVDPIEPEFKGEVDDKYQYSLENKDNQVHGWISFDPPVGFWQITPSNEFR
TGGPFKQDLTSHVNPTTLAIFLTSHYAGTELLVKFETGEEWKKVLGPVFTYFNSVSDKDM
ALSLWDDAKRQMNEEVESWPYSFPTSEEFPKCDQRGVVRGRLLVQDRYLSKENLPGKAAS
VGLAAPGDAGSWQRENKGYQFWTTTDEDGCFVIKNIRAGSYNLYGVVPGFIGDYKYEVVI
TLTEGSDIELGEIVYEPPRDGPTLWEIGIPDRSAAEFYIPDPNPKYVNKLYLNQDKFRQY
GLWERYAELYPENDLVYTVGVSDYQKDWFFAQVNREIGDNVYQSSTWQIKFKICNVDQDG
TYTLRVALAASNHAELQVRINDPTTDPPLLSTGEIGGDNAIARHAIHGIYWLFTVTIRGS
LLLGGENTIFLTQAKTANAFQGIMYDYIRLEGPSCQNGNL
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctacaggactgctgttaaatgctcaaaatgattatgtggtgataaataatgga
gttgtggaaataacttggacaaatccaggaggaattatcaaagggataaagtacaaggga
attgacaacttgttagaagaaaagaataaagatttaaatggagggttttgggaccttaac
tggagcgagtcgagtaatacaaaaacaaggggaaagtttgacacgatacaagggacagat
ttgcaagttatagtggaaaatgaggagcaaattgagctttcattcacaagaatgtggagt
tcagaagtccagggtgaacaagctcctttgtatattgataggaggtttgtagtatttcgt
gatgttccgggattttattcatatgccatctttgagcacacgaaagacatgcctgctttc
caccttaacacaacgagaattgctttcatgctcaataaagaaaagtttcactacatggtc
ataacagatgatagacaaagatttatgcctagtgcagaagaccgacttccaggtagaggc
gaaccattagcctatcctgaagcggttctccttgtcgatcctattgagccagagttcaaa
ggagaggtggatgacaaatatcagtattcacttgaaaacaaagataatcaagtgcatgga
tggatatcttttgaccctcctgtggggttttggcaaattactccgagcaatgaatttcga
acaggagggccatttaaacaagatttaacctcccacgtgaacccgaccacccttgctata
tttctaacttcccactatgctggtacagagcttctggtaaaatttgaaactggggaggag
tggaagaaagtcctcggccccgtgttcacatattttaattctgtatcagacaaagacatg
gctctatctctttgggatgatgcgaaaagacagatgaacgaagaagtcgaatcctggcct
tacagtttcccaacttctgaagagtttcctaagtgtgatcaaaggggcgtagttagaggt
cgattgcttgtgcaagacagatacttgagcaaagaaaatttacctggtaaagctgcatct
gtaggactagcagcgccaggagacgctggatcatggcaaagagagaataagggttaccaa
ttttggactacgacagatgaggatggctgctttgtcattaagaacatacgtgcagggtca
tataatctttacggagtggtgcctggatttatcggagattacaagtatgaagttgtaata
actttaacagaaggttctgatattgagctgggtgagattgtttatgagcctccaagagat
ggtcctaccttatgggagatcggtatccctgaccgctctgctgcagaattttatattcct
gatccaaacccgaaatatgttaacaaactttacctaaatcaagacaaatttaggcagtat
ggtttgtgggagagatatgctgagttatatcccgagaacgatttagtctacacagttgga
gttagtgactatcagaaagactggttctttgctcaggttaacagggaaataggtgacaat
gtatatcaaagtagtacatggcaaatcaagttcaagatttgtaatgtagatcaagatgga
acatacacattgcgcgtagcacttgcagcttctaatcatgctgaattgcaggttcggatc
aacgatccaacaacagatcctcccctactttcaactggagaaattggaggagacaatgca
attgcaagacatgctattcatgggatctattggttgtttactgtaacgatacgtggttct
ctacttttgggaggagaaaacaccatatttttgacacaagcaaagacagccaacgcgttc
caagggattatgtatgactatattcgcttggaaggtccctcgtgccagaacggaaacctc
tga
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