Solanum lycopersicum (tomato): 101250621
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Entry
101250621 CDS
T02665
Name
(RefSeq) zinc finger protein JACKDAW isoform X1
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sly03000
]
101250621
Transcription factors [BR:
sly03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
101250621
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Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-met
zf-C2H2_STOP2_C
zf-C2H2_6
zf-C2H2_4
DNA_pol_viral_C
Motif
Other DBs
NCBI-GeneID:
101250621
NCBI-ProteinID:
XP_004246670
UniProt:
A0A3Q7HWE3
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Position
9:1637141..1639829
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AA seq
459 aa
AA seq
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MMSGDLFSIHQQQHQQVLVEQNPNPKANSSSKKRRNLPGTPDPDAEVIAISPKTLMATNR
FICEICNKGFQRDQNLQLHRRGHNLPWKLKQRNKQEIVKKKVYICPEKSCVHHDPSRALG
DLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHTKTCGTREYKCDCGTLFSRKDSFI
THRAFCDALAEESARITTTNNLNFNQQQQQPVGVSQIGTSFAQDFTSMTTVNPLHQHQQK
PRLSLWLNQANNNMSSQSSNLFGLPDHHMVQIPSHNVFGTNQILNPTPTTTTNTNTNTNT
NTPATPNPPIPMSATALLQKAAQMGSTKSTPNYFSNTFGVMHSSSSPSSNNTTQIFNNNE
IHQAFAKQTEDYNQTENILINGCPNMNSSVNSKAINLDQALLQTRGMHNQNVHFNLHNSL
TRDFLGMGNEGGQPFLPQELAKFASINSAMGLSHYSTGH
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctggagatttgttttcaattcatcaacaacaacatcagcaagtactagttgaa
caaaaccctaaccctaaagctaattcttcttctaagaaaagaagaaatcttccaggtaca
ccagatccagatgctgaagtgattgcaatatcaccaaaaacactgatggctacaaacaga
ttcatatgtgaaatctgcaacaaaggttttcagagggatcaaaacttgcaactccataga
agaggacataatcttccatggaagttgaagcaaaggaacaaacaagaaatagttaagaag
aaagtttacatatgtccagaaaagagttgtgtacatcatgatccatcaagagcacttggt
gaccttactggtataaagaagcattttagcagaaaacatggtgagaaaaaatggaagtgt
gaaaagtgttcaaagaaatatgcagttcaatctgattggaaagctcatactaagacttgt
ggtactagagagtataaatgtgactgtggaacactcttttccaggaaagatagtttcatt
acccatagagctttctgtgatgctttagctgaagagagtgcaagaatcactactaccaac
aatttgaacttcaaccagcaacaacaacaacctgttggagtttcacaaattgggacaagt
tttgctcaagattttacaagtatgacaactgtgaatccactacatcagcatcagcaaaaa
ccaagattatcactttggctaaatcaagctaataacaacatgtcatcacaaagttcaaat
ctttttggcttaccagatcatcatatggtccaaatcccatctcataacgtgtttggtact
aaccaaatactcaaccccacccccaccaccaccaccaacaccaacaccaacactaacact
aacacccctgcaaccccaaacccccctataccgatgtcagcaacagctcttctacaaaaa
gcagcacaaatggggtcaacaaaaagcactccaaactacttttccaacacatttggagta
atgcactcatcatcttctccttcatcaaacaacacaacacaaatcttcaacaacaatgaa
attcatcaagcttttgcaaaacaaacagaggattacaatcaaacagagaatatactcatc
aatgggtgtccaaatatgaattcatctgttaattctaaagcaatcaatttggatcaggca
ttattacaaacacgtggcatgcataatcaaaatgttcatttcaacttgcataatagtctt
actagagattttttaggcatgggaaatgaagggggtcagccatttttgccacaagaatta
gcaaagtttgcttcaatcaattcagctatggggttaagccattacagtactggtcactag
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