KEGG   Solanum lycopersicum (tomato): 101250651
Entry
101250651         CDS       T02665                                 
Name
(RefSeq) probable splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sly00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101250651
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sly03041]
    101250651
Spliceosome [BR:sly03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    101250651
 Complex B
    101250651
 Complex C
   U2 SnRNP specific factors
    101250651
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin
Other DBs
NCBI-GeneID: 101250651
NCBI-ProteinID: XP_010316512
UniProt: A0A3Q7F6K5
LinkDB
Position
2:61906315..61910590
AA seq 804 aa
MLGITPILPLPAPPLDGNLGPTPLAQVVEEPNDVKMEENEEENNKDKVPASVATHTRTIG
IIYPPPDIRSIVDKTSQFVAKNGPEFEKRIVLNNAGNAKFNFLNASDPYHAYYQHRLAEA
RAQNQGSGEQPTQPEDKEATPAPTADDAEATAKPDPSAQFRPVRKVLEPPEAEQYTVRLP
EGITGEEMDIIKLTSQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS
KVLMPPKGLTNKLQKSAADMTTVLERCLHRLEWERSQEQARQKAEDEIEQERVQMAMIDW
HDFVVVETIDFADDEDQDLPPPMTLEEVIRRSKMPTLEEEEYVEPGKEVEMEMDEEEVQL
VEEGMRAATLEENGGVKSAETMAISGENDPPMRIVKNWKRPEERILAERDPTKYVVSPIT
GELIPISEMSEHMRISLIDPKYKEQKDRMFAKIKETTLAQDDEISRNIVGLARTRPDIFG
TTEEEVSNAVKAEIEKKIEEPKQVIWDGHTGSIGRTASQAMSQNSGEDQNDAANDVRNLP
GPQVPPPPRPGLPSVRPLPPPPGLALNIPRPPNTFQYSTPTIAGAAPPPPQPPMVNMIPQ
VRPPPPPMLQLQGQQNLMVNRPPMPPSMAMSSHTLTIPPPPGSQFTPMGAPRPFVPHPMS
QPGMSMVPPPPMPQGMPPPPPPEEAPPLPEEPEPKRQKLDESVLIPEDQFLAQHSGPARI
NVSVPNTDEGNLKGQVLEITVQSLTETIASLKEKISGEIQLPANKQKLSGKAGFLKDNLS
LAYYNVASGETLGLSLRERGGRKR
NT seq 2415 nt   +upstreamnt  +downstreamnt
atgttaggcatcacaccgatattgccccttccggcacccccgttggatgggaatctggga
ccaacacctctagctcaggtggtagaggaaccaaatgatgttaagatggaagagaatgaa
gaggaaaacaataaggacaaggttccagcatctgttgcaacacatacgagaactattggt
atcatttatccccctcctgatattaggagtattgttgacaagacttcacagtttgtggcg
aagaatggtccggaatttgagaagaggattgttctaaataacgctggcaatgcaaaattc
aacttcctgaatgcttctgatccttaccatgcctattatcagcaccgtttggctgaagct
cgcgcacagaatcagggttctggagagcagcctactcagccagaagacaaagaagcaacc
cctgctcctaccgctgatgatgctgaggcaactgcaaaacctgacccatcagctcaattt
agacctgtcagaaaggttcttgagccacctgaggcagagcaatatactgttcgactccct
gaagggatcacaggtgaagaaatggatatcataaagctgacatcacaatttgtggccaga
aatgggaagtctttcttaacagggttgacaagcagggagataaataatccccaatttcat
tttctaaagcctactcacagcatgttcatgtttttcacttcacttgcggatgcgtattcg
aaagttctgatgcctcctaagggcttgacgaataagctgcagaagagtgctgctgacatg
acaacagtcctagagcgttgtctgcatcggttggaatgggaaagatcacaggagcaggct
agacagaaagctgaagatgagatagaacaggagagggtgcagatggctatgattgattgg
catgattttgttgttgttgagacgatagattttgctgatgatgaggatcaggatttacct
ccacctatgacgcttgaggaggttataaggaggagcaagatgcctacattggaggaagag
gaatatgttgagcctggaaaggaggtggaaatggagatggatgaagaagaggtgcagctt
gttgaagaaggtatgcgagctgcgactcttgaagagaatggtggtgtcaagagtgctgaa
accatggcaatttcaggagaaaatgatccaccaatgcggattgtgaagaactggaagagg
cctgaagagagaatcctggcagaaagggacccaactaagtatgttgtctctcctataact
ggtgagttaatacctattagtgagatgtctgaacatatgaggatctctctcattgatccg
aagtacaaggaacagaaggacaggatgtttgcgaagattaaggaaacgactcttgctcaa
gatgatgagatctctaggaacattgttgggcttgcacgaactcgtccagatatatttggt
actacggaagaagaagtttcaaatgcggtcaaggctgagattgagaaaaaaatagaagag
ccgaagcaggtcatatgggatggtcacacaggtagcattggccgcactgcaagccaggca
atgtctcagaacagtggagaggatcagaatgatgctgcaaatgatgtaagaaaccttcct
ggtccacaggttcctccacctcctagacccggtcttccttctgttaggccactacctcca
cctcctgggcttgcgctgaatattcctaggcctcctaatacattccagtattccacacct
accatagctggtgctgctccgcctccacctcaacctcctatggttaacatgattcctcag
gttcggcccccacctcctcccatgctacaactacaaggtcagcaaaacctcatggtcaat
cgtcccccaatgcctccatcaatggctatgagttcgcatacccttactattccaccacct
cctggatcacagtttacacctatgggagcacctcggccctttgttccccacccgatgtcc
cagccgggaatgtctatggtcccgcctcctcctatgccccaaggaatgccaccacctcct
ccaccagaagaagctcctcctctccctgaagagccagagccgaagaggcaaaagcttgac
gagtctgttctcattcctgaagaccagtttttggctcagcattcgggacctgcaaggatc
aatgtatctgtgccgaatactgatgaagggaatctcaaaggacaagttctggaaatcact
gtgcaatctctgaccgaaaccattgcaagtctgaaagagaagatttctggggagatccag
cttcctgcgaacaaacaaaagctgagtggaaaggctggttttctcaaggacaacttgtct
cttgcatactataatgttgcttctggagaaacactcggcctctctctgagagaacgtggt
gggagaaagagatga

DBGET integrated database retrieval system