Solanum lycopersicum (tomato): 101250720
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Entry
101250720 CDS
T02665
Symbol
ccs52A
Name
(RefSeq) protein FIZZY-RELATED 2
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101250720 (ccs52A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sly04121
]
101250720 (ccs52A)
Ubiquitin system [BR:
sly04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
101250720 (ccs52A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
EIF3I
WD40_Gbeta
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_IFT140_1st
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
eIF2A
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
KNTC1_N
Beta-prop_HPS5
Beta-prop_RIG_1st
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_Vps41
Tricorn_2nd
Peptidase_M10_C
Aldo_ket_red
Beta-prop_VPS8
Beta-prop_WDR41
Beta-prop_WDR35_TULP_N
Beta-prop_SCAP
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
101250720
NCBI-ProteinID:
NP_001304999
UniProt:
A0A3Q7IPR3
LinkDB
All DBs
Position
8:65563592..65567810
Genome browser
AA seq
481 aa
AA seq
DB search
MENSSVNPQNPISSSSDLNPKTPSRTNQLIPGFNSYHPSPSRTIYSDRFIPSRSSSNFAL
FDLPLPPQSSSSEDSTNAYTALLRSALFGADCGSVVPPVTPDKSLGLNARNLQICRPNCN
IFRYKTETRQSLQSLSPFGFEDQLPGFSPSPVKANRKVPRSPFKVLDAPALQDDFYLNLV
DWSSHNVLAVGLGSCVYLWHASSSKVVKLCDLGIDDSVSSVGWAQRGTHLAVGTSNGKVQ
LWDSSRCKRIRTMEGHRLRVGALAWSSSMLSSGSRDKSILQRDIRAQEDFVSKLSGHKSE
VCGLKWSYDNRELASGGNDNRLFVWNNHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGG
GTADRCIRFWNTTTNTHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSK
IATLTGHTYRVLYLAISPDGQTIVTGAGDETLRFWNVFPSPKSKNTETEIGASSFGRTQI
R
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggaaaattcttctgtaaatcctcaaaatccaatttcttcatcatctgatctaaatccc
aaaaccccatcaagaacaaatcagttaattccgggtttcaattcatatcatccttcacct
tctagaacaatctacagtgatcgtttcattccgagtagatcttcgtctaattttgctctt
tttgaccttcctttacctccacaatcatcttcatctgaggattccaccaatgcctatact
gcactacttcgttcagctctgtttggagctgattgtggatcggtggtgccgccggtgaca
ccggataagtcgttgggtttaaatgcaagaaatttacagatttgtagacccaattgtaat
atttttcggtataagacggagacccggcaatcattgcagtcattgtcgccgtttgggttt
gaggatcagcttccgggttttagtcctagcccggttaaagctaaccggaaagttccaaga
tcgccttttaaggtgttggatgcgccggcattgcaagatgatttttacttgaacctcgtg
gactggtcgtcgcataatgtgttagctgtggggctagggagctgtgtttatctatggcat
gcatctagtagcaaggtagtgaagttgtgtgacctaggaattgatgatagtgttagttca
gttggttgggcacaacggggcacgcatctagctgttggaacaagtaatggcaaagtccag
ttatgggattcctcgcgctgtaagaggataagaaccatggagggtcatcgattacgagtt
ggcgcacttgcgtggagctcatccatgctgtcttcaggaagccgagacaagagtattctt
cagcgtgatatacgtgctcaagaagattttgtcagtaagctgagtggtcataaatcagag
gtttgtgggctcaaatggtcttatgataaccgtgaattagcttcaggtggaaatgataat
cggctttttgtatggaacaaccattcaacacaacctgtgctgaaatactgtgagcatact
gctgcggttaaggccattgcatggtccccccatctccatgggcttctagcatccggtgga
ggcacagctgatcgatgcattagattctggaacaccaccactaatacacatctcagttgc
atggacactggcagtcaggtctgtaatcttgtgtggtcgaagaatgtcaatgaattagtc
agcacacatggttactctcaaaatcagataatagtttggagatatccgacaatgtctaag
atagctactctgacaggtcatacatatagagtcttatatcttgctatatctccagatgga
cagacaattgtcactggagcaggagatgaaacacttcgattctggaatgttttcccttct
cccaagtcaaagaacaccgagactgaaattggtgcatcttcgtttggtagaactcagatc
aggtga
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