KEGG   Solanum lycopersicum (tomato): 101250720
Entry
101250720         CDS       T02665                                 
Symbol
ccs52A
Name
(RefSeq) protein FIZZY-RELATED 2
  KO
K03364  cell division cycle 20-like protein 1, cofactor of APC complex
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:sly00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    101250720 (ccs52A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sly04121]
    101250720 (ccs52A)
Ubiquitin system [BR:sly04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   APC/C
    Target recognizing subunit
     101250720 (ccs52A)
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_WDR5 WD40 WD40_WDHD1_1st Beta-prop_EML_2 WD40_Prp19 Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR19_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_EML EIF3I WD40_Gbeta ANAPC4_WD40 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_IFT140_1st Beta-prop_Aladin Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR90_POC16_2nd eIF2A Beta-prop_IFT122_1st WDR90_beta-prop_4th KNTC1_N Beta-prop_HPS5 Beta-prop_RIG_1st NBCH_WD40 Beta-prop_DCAF4 Beta-prop_Vps41 Tricorn_2nd Peptidase_M10_C Aldo_ket_red Beta-prop_VPS8 Beta-prop_WDR41 Beta-prop_WDR35_TULP_N Beta-prop_SCAP Beta-prop_SPT8
Other DBs
NCBI-GeneID: 101250720
NCBI-ProteinID: NP_001304999
UniProt: A0A3Q7IPR3
LinkDB
Position
8:65563592..65567810
AA seq 481 aa
MENSSVNPQNPISSSSDLNPKTPSRTNQLIPGFNSYHPSPSRTIYSDRFIPSRSSSNFAL
FDLPLPPQSSSSEDSTNAYTALLRSALFGADCGSVVPPVTPDKSLGLNARNLQICRPNCN
IFRYKTETRQSLQSLSPFGFEDQLPGFSPSPVKANRKVPRSPFKVLDAPALQDDFYLNLV
DWSSHNVLAVGLGSCVYLWHASSSKVVKLCDLGIDDSVSSVGWAQRGTHLAVGTSNGKVQ
LWDSSRCKRIRTMEGHRLRVGALAWSSSMLSSGSRDKSILQRDIRAQEDFVSKLSGHKSE
VCGLKWSYDNRELASGGNDNRLFVWNNHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGG
GTADRCIRFWNTTTNTHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSK
IATLTGHTYRVLYLAISPDGQTIVTGAGDETLRFWNVFPSPKSKNTETEIGASSFGRTQI
R
NT seq 1446 nt   +upstreamnt  +downstreamnt
atggaaaattcttctgtaaatcctcaaaatccaatttcttcatcatctgatctaaatccc
aaaaccccatcaagaacaaatcagttaattccgggtttcaattcatatcatccttcacct
tctagaacaatctacagtgatcgtttcattccgagtagatcttcgtctaattttgctctt
tttgaccttcctttacctccacaatcatcttcatctgaggattccaccaatgcctatact
gcactacttcgttcagctctgtttggagctgattgtggatcggtggtgccgccggtgaca
ccggataagtcgttgggtttaaatgcaagaaatttacagatttgtagacccaattgtaat
atttttcggtataagacggagacccggcaatcattgcagtcattgtcgccgtttgggttt
gaggatcagcttccgggttttagtcctagcccggttaaagctaaccggaaagttccaaga
tcgccttttaaggtgttggatgcgccggcattgcaagatgatttttacttgaacctcgtg
gactggtcgtcgcataatgtgttagctgtggggctagggagctgtgtttatctatggcat
gcatctagtagcaaggtagtgaagttgtgtgacctaggaattgatgatagtgttagttca
gttggttgggcacaacggggcacgcatctagctgttggaacaagtaatggcaaagtccag
ttatgggattcctcgcgctgtaagaggataagaaccatggagggtcatcgattacgagtt
ggcgcacttgcgtggagctcatccatgctgtcttcaggaagccgagacaagagtattctt
cagcgtgatatacgtgctcaagaagattttgtcagtaagctgagtggtcataaatcagag
gtttgtgggctcaaatggtcttatgataaccgtgaattagcttcaggtggaaatgataat
cggctttttgtatggaacaaccattcaacacaacctgtgctgaaatactgtgagcatact
gctgcggttaaggccattgcatggtccccccatctccatgggcttctagcatccggtgga
ggcacagctgatcgatgcattagattctggaacaccaccactaatacacatctcagttgc
atggacactggcagtcaggtctgtaatcttgtgtggtcgaagaatgtcaatgaattagtc
agcacacatggttactctcaaaatcagataatagtttggagatatccgacaatgtctaag
atagctactctgacaggtcatacatatagagtcttatatcttgctatatctccagatgga
cagacaattgtcactggagcaggagatgaaacacttcgattctggaatgttttcccttct
cccaagtcaaagaacaccgagactgaaattggtgcatcttcgtttggtagaactcagatc
aggtga

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