Solanum lycopersicum (tomato): 101250780
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Entry
101250780 CDS
T02665
Symbol
SWI3A
Name
(RefSeq) SWI/SNF complex subunit SWI3A
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101250780 (SWI3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sly03021
]
101250780 (SWI3A)
03036 Chromosome and associated proteins [BR:
sly03036
]
101250780 (SWI3A)
Transcription machinery [BR:
sly03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101250780 (SWI3A)
Chromosome and associated proteins [BR:
sly03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101250780 (SWI3A)
PBAF complex
101250780 (SWI3A)
GBAF(ncBAF) complex
101250780 (SWI3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Beta-prop_HPS5
UPF0167
Myb_DNA-bind_6
NPV_P10
DUF919
Motif
Other DBs
NCBI-GeneID:
101250780
NCBI-ProteinID:
NP_001362571
LinkDB
All DBs
Position
3:complement(56568076..56578941)
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AA seq
573 aa
AA seq
DB search
MDASRLYKSSNELAHDLYTIPSYTSWFSWQSIHEVERLSLREFFDCSSITRTPRIYKEYR
DYIITSYRQDPTRRLSFSDIRKSLVGDISVLHKVFTFLEKWGLINFDPSNAETPAAIHAP
AEEDKEDEKWRIRVEEGTPHGVRVVAAPHSLKPLAPVPSPVITGHRGAGKGRGGGTVDNI
PKFSPMASYLDVYGELVGQQKEESVVCLSCKELCASGHYEYSKDASSNLCEKCFTSGNYD
KNKFADEFKPIDGANPKVNWTEAETLLLLESVLKHGDDWDLVTQNVKTKSKLDCISKLIQ
LPFGDLMLGSIHKKFNFLDKNREVRGVNQAQPAISESRETLGNQSHEQNQERQQNGNAEC
ETPPLKKIRRAPVSEDSSFLMKQVAHISGAVGPHIAASAAEAAVTALCYENQCSTDIFDG
DDNGLVSIADFSETERTSQVVGAEGEEKHVRSETEVEASQRNSISLTLRTRAATATAIGA
AAAHAKLLANQEEREIEYLVSTLVEAQVKKLKRKMKHVEALNLMMEKQHGQMKDLEESLV
TERMDILQKIFSSGVSRWRDHASVKSQSSTSSI
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggatgcatctcgcttgtataaatcctccaacgaactcgctcacgacctttatacaatc
cctagctacaccagttggttttcttggcaaagcatacatgaggtggaaaggttgtcattg
cgagaattcttcgattgcagttcgattacaaggacacccagaatctacaaagagtacagg
gactacatcattacctcataccgtcaggatccgactcgaaggctttcgttttccgatatc
cggaagtcgttggtgggtgatataagtgtgctacacaaggtctttacctttttggagaag
tggggtttgattaattttgaccctagtaatgctgaaacgccggctgctattcatgctcca
gcggaagaggataaggaggatgagaagtggaggattagggttgaagaagggaccccacat
ggggttagggttgtggcagctcctcattctttgaaaccccttgcaccggttccgtcaccg
gttatcacagggcacagaggtgctggaaaggggaggggtggtggtacggtggataatata
ccaaagttttcgcctatggcatcgtatctagatgtttatggggagttggtggggcagcag
aaggaggaaagtgtagtctgtctgagttgtaaagaactgtgtgcttcgggtcattatgag
tacagcaaggatgcgagctcgaatttatgcgagaagtgttttacaagtggtaattatgac
aaaaacaaatttgcagatgaattcaagcccatagatggtgcgaaccctaaagtcaactgg
accgaagccgaaactttactcctattagaatctgtactgaagcatggtgatgactgggat
cttgttactcaaaatgtcaaaacgaagagtaagctggattgtatctccaagcttatacag
ttgccatttggggatcttatgcttggttctattcataaaaagtttaattttttggacaag
aatcgtgaggtaaggggcgtgaatcaagctcaacctgcaataagtgagtctcgagaaact
cttggaaatcaatctcatgagcagaaccaggagcgtcaacagaatggaaatgctgaatgc
gaaacccctcccctcaagaaaatacgcagggctccagtctcagaagacagtagtttcctg
atgaaacaggtagctcacatttctggtgctgttggtccacatatcgcagcatctgcagct
gaggctgctgttacagccctttgctatgagaatcagtgttcaacagacatttttgatgga
gatgataatggattggtatcaattgctgattttagtgagacagagaggacaagtcaagtt
gtaggtgctgaaggggaagaaaagcatgtcagatcagaaacagaagtggaagcctctcag
aggaacagtatatcactaactttacgtacgagggccgcaactgctactgctataggtgct
gctgctgctcatgccaaattgttggccaatcaagaagagagagaaatagaatatctggtt
tctactttggttgaagcacaggtgaagaagttgaaacgcaaaatgaaacatgttgaagct
ctgaacctgatgatggagaagcagcatggccaaatgaaggatctagaagagtctttagtt
acggagagaatggacatcttgcagaagatatttagttccggggtgtctagatggagggat
catgcttcggttaaatctcaaagcagcaccagcagcatataa
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