Solanum lycopersicum (tomato): 101250914
Help
Entry
101250914 CDS
T02665
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly00040
Pentose and glucuronate interconversions
sly01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101250914
Enzymes [BR:
sly01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
101250914
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
NosD
A1_Propeptide
Motif
Other DBs
NCBI-GeneID:
101250914
NCBI-ProteinID:
XP_004228388
UniProt:
A0A3Q7EAE8
LinkDB
All DBs
Position
1:complement(6223306..6227275)
Genome browser
AA seq
439 aa
AA seq
DB search
MAFISGNSILLVLFIWLASLVPHLHARIAEFDPYLEKQALEALNSSLEAYTNNPEEITNA
FNKEVGNALLKYKSLRRHLKEKDKCMATNPIDRCWRCDKNWAENRMDLEECARGFGHKTT
GGKNGKYYVVTDESDDNVQEPKPGTLRHAVIQEEPLWIIFEKSMVIKLRQELMITSDKTI
DGRGVAVHIAYGAGLMIQFVHNVIIHNIRIQNIISTNGGMIRDSINHIGLRTVSDGDGIS
IFGSNHIWIDHCTLSECTDGLIDAIMASTAITISNCKFNYHNDVMLLGATDAFPQDAIMQ
VTVAFNRFGEGLIQRMPRCRWGFFHVVNNDYTHWQMYAIGGSAHPTIISQGNRFKASDNP
NTKQVTKRDYATESEWKKWQWVSEGDSFLNGAYFVESGPQDKKKTALTKNHKIKFKPGSH
AGRLTRFAGVLKCKPGIPC
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggcctttatcagtgggaattcaattttgttagtattgttcatatggttagcttcatta
gtcccacatttacatgccagaattgctgagtttgatccatatttggaaaaacaagctttg
gaagccctcaactcttcacttgaagcatatactaataatcctgaggaaataactaatgca
ttcaacaaagaagttggaaatgcattgctgaagtataaaagcttaaggaggcatcttaaa
gaaaaagataaatgcatggcaaccaatccaattgatagatgctggaggtgtgacaaaaat
tgggctgaaaacaggatggatttggaagagtgtgctaggggatttggccacaagacgacc
ggtggtaaaaatggcaagtactatgttgtcaccgatgaatcagatgataacgtgcaggaa
ccaaaaccagggacccttcgtcatgctgtgattcaagaggagccattgtggatcatcttt
gagaaatcaatggtgatcaagttgcgacaagaacttatgatcacgagtgacaagacaatc
gatggcaggggagtcgctgttcacatagcttatggtgctggattaatgatccaattcgtg
cataatgtcataatccacaacatcaggattcagaatatcatatctactaatggtggcatg
ataagagattctattaaccatattggtctaaggacagtgagcgatggcgatggcatttcc
atttttggttccaatcatatctggattgatcattgcactttgtctgaatgtacagatggc
ctcattgatgccatcatggcttccactgctatcaccatttctaattgcaaattcaactat
cataacgacgtgatgcttttgggggcaactgatgcctttcctcaagatgcaataatgcaa
gtcacagttgcattcaatcggttcggggagggattgattcagaggatgccaaggtgcaga
tggggattcttccatgttgtcaacaacgactacactcattggcaaatgtacgcgattggt
ggcagtgctcatccaaccattatcagtcagggtaatcgtttcaaggcttccgataatcct
aatacgaagcaggtgactaagagggattacgcaacagaatccgagtggaagaagtggcaa
tgggtatcagagggcgattcgttcttaaatggagcttattttgtagagtcagggccacaa
gacaagaaaaaaactgcattgacaaaaaatcataagatcaagttcaaacctggttcacat
gcaggacgactcactcgctttgctggtgtgctcaagtgcaaacctggcataccttgttag
DBGET
integrated database retrieval system
