Solanum lycopersicum (tomato): 101250927
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Entry
101250927 CDS
T02665
Name
(RefSeq) chaperonin CPN60-2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101250927
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sly03019
]
101250927
03110 Chaperones and folding catalysts [BR:
sly03110
]
101250927
03029 Mitochondrial biogenesis [BR:
sly03029
]
101250927
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sly04147
]
101250927
Enzymes [BR:
sly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
101250927
Messenger RNA biogenesis [BR:
sly03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
101250927
Chaperones and folding catalysts [BR:
sly03110
]
Heat shock proteins
HSP60 / Chaperonin
101250927
Mitochondrial biogenesis [BR:
sly03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
101250927
Exosome [BR:
sly04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
101250927
Exosomal proteins of other body fluids (saliva and urine)
101250927
Exosomal proteins of breast cancer cells
101250927
Exosomal proteins of colorectal cancer cells
101250927
Exosomal proteins of bladder cancer cells
101250927
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Flavoprotein
Motif
Other DBs
NCBI-GeneID:
101250927
NCBI-ProteinID:
XP_004247810
UniProt:
A0A3Q7I956
LinkDB
All DBs
Position
9:67975875..67981472
Genome browser
AA seq
579 aa
AA seq
DB search
MYRFAANLASKASVARTSSQKIGGRLNWSRNYAAKDIRFGVEARALMLQGVEQLADAVKV
TMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKIQNVGASLVKQVANATNDVAGDGT
TCATVLTRAIFAEGCKSVAAGMNAMDLRRGITMAVDSVVTNLKSRARMISTSEEIAQVGT
ISANGERVIGDLIARAMEKVGKEGVITIQDGKTLLNELDVVEGMKLDRGYISPYFITNQK
NQKCELDNPLILIHEKKISSINAVVKALELALKRQRPLLIVAEDVDNEALATLILNKLRA
GIKVCAIKAPGFGENRKAYLQDLAILTGGQVITEELGLNIENLEFEMLGTSKEATISKDD
TVILDGAGEKKSIEERCELIRSTIEQSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEV
GEKKDRVTDALNATKAAVEEGIVPGGGVALLYAARELDNLTTANFDQKIGVQIIQNALKT
PVHTIASNAGVEGAVVVGKLLDQDNLDLGYDAAKGEYVDMIKAGIIDPVKVIRTALVDAA
SVSSLLTTTEAVVVELPKDEKESPAMGGGMGGGMGGMDF
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgttttgcagcaaatcttgcttctaaagccagtgttgcaagaaccagttcccaa
aagattggtgggaggttgaattggagtagaaactatgctgcaaaggatatcagatttgga
gttgaagctagagctttgatgcttcaaggtgttgagcagcttgctgatgctgttaaagtc
actatgggtccaaaggggcgtaatgtggtgattgaacaaagttggggtgcacccaaagtg
acaaaagatggcgtgactgttgcaaaaagtattgaattcaaggacaagatacaaaatgtt
ggtgctagccttgtaaaacaagtcgccaatgcaacaaatgatgttgctggtgatggtacc
acttgtgcaacagttctcacccgagcaatatttgctgaaggatgcaagtcagtggcagct
ggtatgaatgcaatggaccttagacggggtattaccatggctgtagattctgttgtgaca
aacctgaaaagcagagcacggatgatcagtacatctgaggaaattgcacaggttgggact
atctctgcaaacggagaaagagtaattggcgacctcattgcaagggcaatggagaaagta
ggcaaggagggagtcatcactattcaagacgggaagacattgctcaatgagttggatgtt
gttgaagggatgaagttggatagaggttacatatcaccatacttcatcacaaatcagaag
aatcagaaatgtgaactggataacccactaattctgattcatgagaaaaagatctcaagc
attaatgctgttgtgaaagcattggagttagctctgaagagacaaaggcccctcttaatt
gtggctgaagatgtggacaatgaagcactcgccactcttattttgaacaaactccgtgct
ggaatcaaggtttgtgccatcaaagcaccaggctttggtgaaaacaggaaagcttatttg
caagatcttgctattttaactggaggccaagtcataacagaagagcttggactgaacatt
gaaaatttggagttcgagatgctgggaacaagtaaagaggcaactatctctaaggatgat
actgtcattcttgatggtgctggtgagaagaagtccatcgaggaacgatgcgaactgatt
agatcaaccattgaacagagcacatctgactatgacaaggagaagttgcaggaaagacta
gctaagctttcagggggtgttgctgtgttaaagattggaggagccagtgaagctgaggtt
ggtgaaaagaaagatagagtaactgatgctttgaacgccacaaaggctgcagtggaggaa
ggaattgttccaggtggtggtgttgctcttctttatgcagcaagagaattggataatttg
acaacagccaactttgaccagaagattggtgtacaaattattcagaatgctctgaagacg
ccagtacatacaatagcctctaacgcaggagtagagggtgctgtcgtggttggcaaattg
ttggatcaggacaaccttgatcttggatatgatgcggccaagggtgaatatgtagatatg
ataaaggcaggaatcatcgatccagtgaaagtgatcaggacagctttggtcgatgctgcc
agtgtctcgtctcttttgaccacaactgaagcagttgttgtcgagcttcctaaggacgag
aaggaatctcctgcaatgggtggcggtatgggtggtggtatgggtggcatggacttctga
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