Solanum lycopersicum (tomato): 101250942
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Entry
101250942 CDS
T02665
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101250942
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sly01009
]
101250942
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sly03019
]
101250942
03036 Chromosome and associated proteins [BR:
sly03036
]
101250942
Protein phosphatases and associated proteins [BR:
sly01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
101250942
Messenger RNA biogenesis [BR:
sly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
101250942
Chromosome and associated proteins [BR:
sly03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
101250942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
DHC_N1
Motif
Other DBs
NCBI-GeneID:
101250942
NCBI-ProteinID:
XP_004231808
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All DBs
Position
2:complement(55148103..55153814)
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AA seq
523 aa
AA seq
DB search
MIKQILNRLPRKPSKSAENRDGGSSASPSNASTGSRSSDLSTAQSGNSSATTVSGVTSST
LGPNHGNRLPQGANAKVNGSAAVFLCETLPSFKDVPTAEKQNLFIKKLNLCCVLFDFTDP
TKHLKEKDIKRQTLIELVDYLSSANGKFTETVIQEIVKMVSSNLFRSLTPQPRENKVLEA
FDLEDDEPLMDPAWPHLQIVYEFFLRFVASPETDAKLSKRYVDHSFVLRLLDLFDSEDPR
EREFLKTVLHRIYGKFMVHRPFIRKSINNIFYRFIFETEKHNGIAELLEILGSIINGFAL
PLKEEHKLFLVRALIPLHKPKCVHMYHQQLSYCITQFVEKDCKLADTVIRGLLKYWPITN
SSKEVVFLGELEEVLEATQPPEFQRCMVPLFHQISRCLSSSHFQVAERALFLWNNDHVEN
LIKQNHRVILPIIFPSLEKNARGHWNQAVQNLTLNVRKIFSDIDSELFEECLQKFEEDEA
QEEEVKRKREITWKRLEELAGVKAASNEPVLVSHKITPHPPSG
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacagatacttaataggctccctagaaagccttccaagtcagcagaaaatcgc
gatggaggaagctctgcatcaccgtccaatgcttcaactggttctagaagcagtgatttg
tctactgcgcagtcaggaaattcaagtgccactactgtttcaggagtcacttcttcaact
ctgggaccaaatcatggaaataggctaccgcagggggcaaatgctaaggtgaatggaagt
gcagcagtttttctgtgtgagaccttgcctagttttaaagatgtaccaactgctgagaaa
caaaacttgttcataaaaaaactgaacttgtgctgtgtattatttgactttactgaccca
acaaagcacttgaaagaaaaagacatcaagcggcagacattaatagagcttgttgattat
cttagttctgcaaatggaaaattcacagaaactgtcattcaagaaattgttaaaatggtg
tcttcaaatctgttcaggtctctaactcctcaacctcgtgaaaacaaagtattggaagct
tttgacttggaagatgacgaacccttgatggatcccgcatggccacatttgcaaattgtg
tatgagttctttctcagatttgtggcatcaccggagacagatgcaaaattgtctaagcga
tatgttgaccattcttttgttctaaggttattagatctctttgattcagaagatccaaga
gaaagggagttcttgaagacggttctgcaccgaatatatggaaaattcatggtgcaccgc
ccttttattaggaaatcaatcaacaatatattttaccggtttatctttgaaactgagaag
cataatggaatagcagaacttttagaaattttgggcagtataatcaatggatttgcactt
ccactgaaggaagagcacaagttgttccttgtccgagctcttattccacttcataaacca
aagtgcgtacacatgtatcatcagcagttatcttactgcataacacaatttgtggagaag
gattgcaagcttgctgatactgtcataagaggtttgttgaaatattggcctatcacaaac
agttccaaggaagtagtgttcttaggtgagctggaggaggttctagaagcaactcagcct
ccagaattccagcgttgtatggtgcctttgtttcatcagatcagtcgttgtttgagcagc
tcgcactttcaggtggctgagagggccttgttcctatggaacaatgatcatgttgagaac
ctaatcaaacaaaatcatagagttatactgccgataatcttcccttccttggagaagaat
gctagaggccactggaatcaggcggtgcaaaacttgacattaaatgtccgcaagatcttc
tctgatatcgattctgaactctttgaagagtgtttgcagaaattcgaagaagacgaggcc
caagaagaggaggtaaagaggaaacgtgaaattacttggaaacggttagaggagcttgct
ggagtgaaagctgcaagcaatgagccagtgctagtttctcataagataacacctcatcca
ccatctggctag
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