Solanum lycopersicum (tomato): 101251072
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Entry
101251072 CDS
T02665
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex-like
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101251072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sly04121
]
101251072
03036 Chromosome and associated proteins [BR:
sly03036
]
101251072
Ubiquitin system [BR:
sly04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
101251072
Chromosome and associated proteins [BR:
sly03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
101251072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_EML
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
EIF3I
WD40_Gbeta
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_SCAP
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_ACSF4
Beta-prop_WDR35_TULP_N
Ge1_WD40
eIF2A
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
101251072
NCBI-ProteinID:
XP_010318209
UniProt:
A0A3Q7GBA9
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All DBs
Position
3:complement(52960342..52962532)
Genome browser
AA seq
460 aa
AA seq
DB search
MNDNSLTKIQPDWYSPTRLHDTPLDYDFPGDRFIPNRSLMDLHQAHTLLTNRTNNKLQKP
NFNDEYRRKMEESLKLDVEGRPFRMLVFRGSPKWSRNSTRLIDEMRRSDKEIPLQINENR
RYRKFPLKAIRALDAPLLSDDYYSNVMDWGKSNILAVVLGSILYIWNAQVQKAAVLMEVK
REDDCPTSVAWSDDGKIVAVGCDSSKLQLWDAETSRLVRDLQGHQSRVGCVAWKGHVLTS
GSKDRAIINHDVRARSNLVSVTRAHRGEVCGVKWSSTGNALASGGNDNLVYIWDSFKMSS
RHYTHRFNEHQAAVKALAWCPYSSDVLASGGGIDDGCLKIWNTQKGTCISTNETGAQICG
LQWNRHHKEILSGHGFGRGESHCQLCLWSYPSMARIGEPLRHASSSRILHLSQSPDGLTV
VSAGADETLRFWEIFGPPQESSENVTHLDNLLSFKASAVR
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacaattcattaacaaaaattcaaccagattggtattctccaactcgacttcac
gatactccgctcgactatgattttcctggtgatagatttatacccaatagaagcctgatg
gatcttcatcaagcacatacattactcaccaacagaacgaataacaaactccaaaaaccc
aacttcaatgatgaatatagaaggaaaatggaggaaagtctaaagttggatgtagaagga
agaccattcagaatgctggtttttagaggaagtcctaaatggagtagaaactctacgcgt
ctaattgatgaaatgaggcgtagtgacaaagaaattcccctgcaaattaatgagaatagg
agatatcgaaagtttcctttgaaagcaattcgagctttagatgctcctcttttatcggat
gactattactcgaatgttatggattggggaaaatccaacatacttgctgttgttctgggg
tcaattctatacatatggaatgctcaagtgcaaaaagctgcggtactgatggaagtgaag
cgtgaagacgattgtcctactagtgtagcatggtctgatgatgggaaaatagtagcagtt
ggttgtgattcctctaaactccagctctgggatgctgagacttccaggcttgtgagagac
ctgcaaggccatcagagcagagtgggttgtgttgcatggaagggtcatgttttaacctca
ggaagtaaagacagagctattattaatcatgatgtgcgagcaagaagcaatttggtctct
gtaacaagagcacatagaggggaagtttgtggggtgaagtggtctagtacagggaatgca
cttgccagtggtggaaatgacaatctggtgtacatatgggatagtttcaagatgagctca
aggcattatacgcacaggttcaatgaacatcaagctgcagtcaaggccctagcttggtgt
ccatatagcagtgatgtattagcctctggagggggcatagatgacggatgtcttaagatt
tggaacacacagaaggggacatgcatcagcaccaatgaaactggagctcagatttgtgga
cttcaatggaacaggcatcacaaagagatattaagtggccatgggtttggaagaggtgaa
tctcattgtcagttgtgtttatggagttatccttccatggctagaataggagagccattg
cgtcatgcttcttcatcaagaattctgcatctctctcagagccctgatggtttgactgtg
gtatcggctggagcagatgagactcttaggttctgggagatatttggtcccccacaggag
agcagtgaaaatgtaacacatttggataatctcttgtcctttaaggcatcagcagtgaga
tag
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