Solanum lycopersicum (tomato): 101251188
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Entry
101251188 CDS
T02665
Name
(RefSeq) SKP1-like protein 1B
KO
K03094
S-phase kinase-associated protein 1
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03083
Polycomb repressive complex
sly04120
Ubiquitin mediated proteolysis
sly04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
101251188
04120 Ubiquitin mediated proteolysis
101251188
09126 Chromosome
03083 Polycomb repressive complex
101251188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sly04131
]
101251188
04121 Ubiquitin system [BR:
sly04121
]
101251188
03036 Chromosome and associated proteins [BR:
sly03036
]
101251188
Membrane trafficking [BR:
sly04131
]
Endosome - Lysosome transport
Acidification regulators
RAVE complex
101251188
Ubiquitin system [BR:
sly04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Adaptor protein
101251188
Cul7 complex
101251188
Chromosome and associated proteins [BR:
sly03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
101251188
Centromeric chromatin formation proteins
Kinetochore proteins
CBF3 complex
101251188
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Skp1
Skp1_POZ
CCDC73
DUF6694
Motif
Other DBs
NCBI-GeneID:
101251188
NCBI-ProteinID:
XP_010321926
LinkDB
All DBs
Position
6:4179639..4180088
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AA seq
149 aa
AA seq
DB search
MSSENIITLKTSDNKEFKLEKSVAVKSEVIKSFVQDNDCTFIPLTNVDGKTIEKMINYWK
KHSEEGVTEVQLENFDQNFLKMSHAELFDVHLAARYLDDKQLEEVIIQESIDRINGKTLE
EIREVFDIVNDYTPEEEEQVRRENAWAFK
NT seq
450 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagaaaatatcataactcttaagactagcgataataaggaattcaaactagaa
aagtctgtagcggtaaagtcagaagtcatcaagagctttgtacaagataatgattgtact
ttcatccccttgactaatgttgatggaaaaacaatagaaaaaatgataaattattggaag
aaacattcggaggaaggtgttacggaagttcaactagagaattttgatcagaatttcttg
aagatgagccacgcagaattatttgatgttcacttggctgctagatatcttgatgataag
cagttggaggaggtaataatccaagaatctattgatagaataaatgggaaaacactagag
gaaatacgtgaagtatttgatatcgtgaatgattatactccagaggaagaggagcaggtc
cgtagagagaatgcttgggcttttaaatga
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