Solanum lycopersicum (tomato): 101251347
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Entry
101251347 CDS
T02665
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sly03041
]
101251347
Spliceosome [BR:
sly03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
101251347
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
DUF4523
Motif
Other DBs
NCBI-GeneID:
101251347
NCBI-ProteinID:
XP_004232215
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Position
2:complement(66615042..66623435)
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AA seq
466 aa
AA seq
DB search
MSTSGQQQFRYTQTPSKVLHLRNLPWDCSDEELVELCKPFGKIVNTKCNVGANRNQAFVE
FADLNQAINMVSYYASSSEPAQVRGKTVYIQYSNRNEIVNNKSPGDVPGNVLLVTIEGVE
AGDVSIDVIHLVFSAFGFVQKIATFEKAAGFQALIQFSDVGTASAAREALDGRSIPKYLL
PEHVNHCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAMEGVLQPVVGPDGKKKEP
ESNVLFASLENMQYAVTVDVLNTVFSAFGTVQKIAIFEKNGQTQALVQYPDVTIAAAAKD
ALEGHCIYDGGYCKLHLSYSRHTDLNVQAYSDKSRDYTVPESSLLAMQQASAVHAAPAVW
HNPQSGPVQSSAGYAATGAVPGQAPPPAWNPNLQGGGSTFPSAPTGYPGHSYAPPAYATG
VHPIGSSQQTNHIATGSQPFTVSQPFHPSTMPPGGVPPPGHAPYHG
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacatccgggcaacagcagttccggtacacgcagacaccgtcgaaagttcttcac
ctccggaatcttccatgggattgcagcgatgaagagctagtagagctttgcaagcccttt
ggtaaaattgtcaatacaaagtgtaacgtcggggccaatcgcaaccaagcgtttgtcgaa
tttgctgaccttaatcaggcaatcaatatggtttcatattatgcttcatcttcagagcct
gctcaagttcgtggcaagacggtgtacattcaatattctaataggaatgaaattgtcaat
aataagagtccgggagatgttccaggaaatgttttgctggtgactatcgagggtgttgaa
gctggtgatgtcagtatcgatgtcattcatttggtattttcagcctttggttttgttcaa
aagattgctacttttgaaaaggctgcaggttttcaggcattgattcaatttagtgatgtt
gggacagcatctgctgctagagaggcattggatgggagaagtataccaaagtacctgctt
ccagaacatgttaatcattgtcacttgcgcatctcatattcagcacacacggatcttaat
atcaagtttcaatctcatcgaagcagggactacacaaacccttatctcccagtaaatcct
actgcaatggagggggttcttcagcctgttgtaggtccagatggaaagaaaaaggaaccc
gagagtaatgtgctttttgcctctttagaaaatatgcagtatgctgttaccgttgatgtc
cttaacacggttttttctgcatttggtactgttcagaagatcgctatatttgagaagaat
ggtcaaacccaggcattagttcagtatcctgatgtaacaattgcagctgctgcaaaggac
gctttagagggacactgcatatatgatggtggctattgtaagcttcatctatcatactct
cgtcatactgatctgaatgtacaggcatacagtgataaaagtagagactacacagttcca
gaatcaagtttgcttgcgatgcaacaagcatctgcagtccatgccgcaccagctgtttgg
cataatcctcagtctggtccagtgcagtcatcagctggctatgccgctactggtgctgtt
cctggccaagcaccaccacctgcatggaatccaaatttgcagggtggaggatcaaccttt
ccatcggctcctaccggatatccaggtcattcatatgctccaccagcttatgcaactgga
gtacatcctattggatcgtcacagcagaccaatcacattgctactggtagtcaacctttt
actgtaagtcagccttttcatccatcaaccatgccgcctggaggtgttcctcctcctggg
catgcaccttatcatggttaa
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