Solanum lycopersicum (tomato): 101251515
Help
Entry
101251515 CDS
T02665
Name
(RefSeq) vacuolar protein sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101251515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sly04131
]
101251515
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sly04147
]
101251515
Membrane trafficking [BR:
sly04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
101251515
Exosome [BR:
sly04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
101251515
Exosomal proteins of colorectal cancer cells
101251515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
MKT1_C
PH_TFIIH
HTH_10
Motif
Other DBs
NCBI-GeneID:
101251515
NCBI-ProteinID:
XP_004230065
UniProt:
A0A3Q7EM91
LinkDB
All DBs
Position
1:complement(83767310..83776445)
Genome browser
AA seq
438 aa
AA seq
DB search
MAGNWLPAAQLTGSGRPVLQPGEVECSLLSSVDLFSEETPSFPNLKAGVVILTTHRLIWV
QESTTSPTAIFIPLSAVTHIFSLKRSIKSMFASPRFRFQASLGEKGTKGVVVITLILRGK
SDIESFVEKFWEAWRKKAWEDGKKSGQEASGSGLGSGHGSGVDGGLAVRMPVVGVAGILR
KEQEIWENTDKSLQEAFQDLNALMNKAKEMVTLAERMRAKLLSGSTSQATGTNDEENGTK
EEMQELLLSVGIVSPVTKESAGALYHQQLSRQLADFAKIPLERAGGMINLIDIYCLFNRA
RGTELISPDDLLRACSLWEKFDVPVMLRTFDSGVMVIQSKSHSDFEVFTRIRSMVTTPDA
LRAGVTASDAAMTLGIAPAMAKEHLLAAEGKGLLCRDVSPDGFRFFVNLLQEVDADDIFL
VKDYGIYQTWVKVISDAR
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggccggaaattggctaccggcggcacagctcaccgggagtgggcgaccggttcttcaa
ccaggtgaagtagagtgcagccttctctcctccgttgacctcttttctgaagaaaccccc
agtttcccaaacctaaaagccggcgtcgttattctcacaactcatcgtcttatctgggtc
caagaatccaccacctcccctactgccattttcatccctctctcagccgtcacccacatc
ttctccctcaaaaggtccatcaagtcaatgttcgctagcccaagattccgatttcaggca
tcactgggtgaaaagggcacgaaaggggtcgtggtgattactttgattcttagggggaaa
tcggatattgaatctttcgtggagaagttttgggaagcatggagaaagaaggcttgggaa
gatgggaaaaaatctgggcaggaggcttcgggttctgggttaggatcaggtcatgggtcg
ggtgttgacggaggattggcggtgaggatgccagttgttggggtagctgggatattgagg
aaagagcaggaaatatgggagaatactgataagagcttgcaggaagcttttcaggatttg
aacgctcttatgaataaagctaaagaaatggtgactctagcagagagaatgagagcaaag
cttctctccggctcaactagtcaggccactggcacaaatgatgaggaaaatggaaccaaa
gaagagatgcaagaattgctattaagtgttggtattgtgtctcctgttactaaagaatct
gctggtgcattgtatcatcaacaattatctcggcagttggcagattttgcgaaaattcca
ctggagagagctggaggaatgattaatcttattgacatctattgccttttcaaccgggct
cgtggaacagaattgatctcacctgacgatttgctgcgtgcgtgttctctctgggagaag
tttgacgtaccagttatgcttcgcacgtttgatagtggtgtcatggtcatccaaagcaaa
agccacagtgattttgaggtatttactagaattagatctatggttactacacctgatgct
ttacgagcaggggtcactgctagtgatgctgcaatgactttgggaattgctccagcaatg
gctaaagagcaccttctcgcagccgagggcaaaggacttctgtgcagagatgttagtcca
gatggattccgctttttcgtcaatttgttgcaagaagttgatgctgatgatatattctta
gtgaaagattatggaatctatcagacatgggtcaaagttatctctgatgccaggtga
DBGET
integrated database retrieval system
