Solanum lycopersicum (tomato): 101251522
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Entry
101251522 CDS
T02665
Name
(RefSeq) uncharacterized protein
KO
K10891
fanconi anemia group D2 protein
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
101251522
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sly03400
]
101251522
DNA repair and recombination proteins [BR:
sly03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
101251522
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FancD2
FANCI_S1
FANCI_S2
Motif
Other DBs
NCBI-GeneID:
101251522
NCBI-ProteinID:
XP_010327602
LinkDB
All DBs
Position
1:complement(83912285..83932164)
Genome browser
AA seq
1502 aa
AA seq
DB search
MVLPQNKQIGPRKRPAKLKTGFVTPFAPPNKIPKSAVSNEENVPQTALESEAPKLRQSQT
VNSIEKMISVLADAGCTLINPSGPPCLPSDLHKLRNQLNSLFSSDSSLKSEFLLGLSSYI
NSPSNLRRILTPSKRDGLGSVRSDSLARVLLLVPAVQSDIQNLLLEKLPEYFDVDPAGNI
GGRSSSLCLEEDIARLIINQFRWLDFLVDSEAFTEKLFQVLSICPVHLKKEIIGSLPEII
GEKNNRTVVDSLQEMLQEDTSIIVPMLDCFSNLHLDDMLQEQVITVALSCIRTIDAEHMP
YLLRFLLLLATPTNTRRIISHIRHQLKLVGASNVWTTQQRKMKGKSVVNNAEASILDALR
TSFRFNKVICQETLNELKSLEKVQDHKIIDIWLLTLIYMNNEPLQKIVEKLLKKKILEGC
IVETMFDQCVSGNTDLTRDYLPTLLSISEYLLACKEDKVREFGVRMYTDLFKNLVDSYSR
QEVLGTLITHVGSGISHEVSSAMDVMVLLASKYSQELIPLSSHINGILDYLETFSIGNLH
KVYEVFSLLAFSAEVSTGPFGSPISNELLVIVRKQLSHPDLTYKKMGLIGTLKIVSYLGD
AKTTKHLPSSQESNHEEALELLETSMNSCKQLPLPLIMFYDELALTLKKKALHPAIVEWT
SKHVGDFESKFLCDLDGGKLMVNDLYCGLEGDLWMNLDGDISPICLNILPLVSSSLRAAS
SLQILPANFFLLSSIEGLANQGSLAGIDALLGCPIHLPSSKFFGEPLWGSLSGKQKKIII
LSLYYAVNWLRELLNAFCTQAVDECSAVSQATREEIALKLFKRLRNLVFLESLLNISLKQ
CSFSLPELQPHLESLSPNQLDHNRDQEMKNGNGNGNVGPSQKKKKEKKSSQASLTDGQLR
QPTIMDVLRKAGAVPSQEPSTAPSGTCSKGSAPEPSVNQPRNVNMSANVDVSTAVEHVEA
QRHKFRPLLLDCFAILAFQKTEDSCCADPASELPLCLYFLRDLNKKLDYFSPRRHILVRR
MSVPPAFGEMKVIEFISKIQPLFPSLRRHLDSAVSGVRKDTDTCPDHWRTHSAFAGNPDL
LNITSLRPSVSRSVIKETLQCFGKTLNIPNVQRDRSVLSDLLEAFQPISISDCFFQGMQL
IPSPGDIGYLYAGAYLFVGIIFDEACAVSFALASEVLLSLESVIVSFRTILDNDLNDIGE
DIRTGFSKELLSFLSKKLGSSAYKLLMQKCDGVNEIEDGQKVRAEVIQKLLRIHLENCQS
TSDSLCELACSVLPQVSLHRSALEDHCRFSTLCPATFYIWYRVLHEENLAMINRLIKEIS
LLEKARGGEVEDVKCLLKKLQQSVNVVVSLVNLCKTHDKVNVRAIAVKFGGKFVDSFLKA
FGFLQGQFELHREQIIQMVRELQTATRTIQTLCSDAKGMKQTAITSKIPITKRSMERFLF
RVKELLHSTSSGCTFWMGNLKHKNLMGDVVSSQAYVDDQKDNMDNVSTENMDIDEPADIA
GE
NT seq
4509 nt
NT seq
+upstream
nt +downstream
nt
atggttcttccccagaacaagcaaatcggtccacgtaaacgtccggcgaaattgaaaact
ggattcgttactccgtttgctccgcccaacaaaattcccaaatccgctgtctcaaacgag
gaaaatgttccgcaaacagcattggaatcggaagcgccaaagttaagacagtcacaaact
gtaaattctattgagaaaatgatttcagttctagcagatgccggctgtacgttgatcaac
ccctcgggtccgccctgtctaccatctgatctacataagcttcggaaccaactcaacagt
ctcttctcatctgattcctctctgaagtctgagttcctcctgggtctctcgtcttacatc
aactctccaagtaaccttcggcgcattttaacaccttcaaaacgagatggacttggatca
gtacggagtgacagcctggcaagagtactgctactggttcctgcagtccagtcagacatt
caaaacttgctgcttgaaaagcttcctgagtattttgatgtggaccctgctggaaatatt
ggagggagatcatcttctttatgtcttgaagaagacatagcaaggttgattattaaccaa
ttcaggtggcttgacttccttgtagattcagaagcatttacagaaaaactatttcaagtg
ttatcaatttgcccggttcatttgaagaaggagataattgggtccttgcccgagattatt
ggggagaaaaacaacagaactgttgtagattcgcttcaggagatgcttcaagaggatact
tcaattattgttcccatgcttgattgtttctctaacctccatctggatgatatgttgcaa
gaacaggtcattacagtggcgttatcttgtatccgaactattgatgcggagcatatgccc
tacctattgagattcttactgcttttggctacaccaaccaatactcgtaggattatttca
cacatccgacatcaactgaaacttgttggagcatcaaacgtttggaccacacaacaaaga
aagatgaagggaaagtcagtcgtcaacaatgcagaagcttcaatacttgatgccttgcga
acaagttttcgatttaataaagtaatttgccaagagacattgaatgaactgaaaagccta
gagaaagttcaggatcataagatcatagacatatggttgcttacacttatatacatgaac
aacgagcctttacaaaagattgttgagaagttactgaagaaaaaaattcttgagggctgt
attgtggaaactatgtttgatcaatgtgtttctgggaatacagatttgactcgggattat
cttcctaccctcctttccatttctgagtacttactggcttgcaaagaagataaagtacgg
gaattcggcgttcgcatgtacacagatctgttcaaaaaccttgtggatagttattcaaga
caggaagtccttggaacattaattactcatgtgggctctgggataagtcatgaagtgagt
tctgctatggatgtgatggtcctcctagcctcgaagtactcacaggagttgattccactt
tcttctcatataaatggcatcctagattacttggagacatttagtattggaaacctgcat
aaggtgtatgaagtcttcagtcttctggcattttctgctgaagtgagtacagggcccttt
ggatctcctatttcaaatgaactactagtgattgtgagaaagcagttgagtcatcccgat
cttacttataagaagatgggcttaattggaactcttaaaatagtatcctaccttggggat
gcaaaaactacgaaacatcttccatcatctcaggagtcaaatcatgaggaagctttggag
ctcttggaaacatctatgaactcttgcaagcagctaccactaccattaattatgttttat
gatgaactggctttaacattgaagaaaaaagcacttcatccagccatagtggaatggaca
agcaaacatgttggggacttcgaatcaaagtttttgtgtgacctcgatggtgggaagctt
atggtcaatgacttatattgtggtttggaaggagacttatggatgaaccttgacggagac
atatctcctatatgtctcaatatcttgccacttgtatcctcttctttgcgggctgcttca
tcactgcaaattcttccagcaaacttttttttgctatcttcaattgaggggttggcaaat
caaggatctcttgcaggaattgatgcacttcttggctgtcctatacaccttccttcctct
aagttcttcggtgaaccactttggggatctttaagtggaaagcagaagaaaatcattatt
ctatcattgtactatgctgtcaattggctgcgggaactgctcaatgccttctgtactcaa
gctgttgatgagtgcagtgcagtcagtcaagcaacaagagaggagatagctcttaaacta
tttaagcggttgaggaaccttgtatttttggagagcttgctaaacatttccctcaaacaa
tgctctttttccttacctgaactccaacctcatctggagtccttgtcgccgaaccaactt
gatcataatagagatcaggagatgaagaatggtaatggtaatggtaatgttggtccatca
caaaagaagaagaaagagaagaagagcagccaagcatcacttactgatggacaacttagg
cagccaaccatcatggatgttttgaggaaagcaggtgcagttccaagccaggaaccaagc
actgctccttctggaacgtgttctaaaggtagtgcgcctgagccatcagtgaaccaacca
cgtaatgttaatatgtcagcgaatgtagatgtttctactgctgtggagcatgtcgaagca
caaagacacaaattcaggcctcttttgctggattgttttgctattttagcttttcagaag
actgaggattcctgctgtgcagatccagcttctgagttgcccctttgtctttattttctg
agggatctaaacaaaaagctggactacttcagtccacgaaggcatatattggttagacgc
atgagtgttcctcctgcttttggtgagatgaaagtaatagagttcataagcaaaattcag
ccactatttccttcccttagaagacatttggattctgcagtatctggtgttagaaaagat
acagacacatgcccagatcattggagaactcattctgcctttgctggaaatcctgattta
ctcaacattacaagcttaagaccatcagtatctagatctgtcataaaagagacacttcaa
tgctttggcaagacgttaaacatacctaatgttcagagagacaggtcagtactttctgat
cttctggaggcattccagccaatcagcatttcagactgctttttccaaggcatgcaattg
attccatcaccaggagatataggttatttatatgctggtgcatatttatttgttgggatc
atctttgatgaagcatgtgctgtctcatttgctttggcttccgaagtattgttaagcttg
gaatcagttattgtgtctttccggactatcctagataacgatctcaacgatattggagaa
gatattcgtacaggtttttcaaaagagctactttcttttctgtccaagaagctgggcagt
tctgcttacaaactcttgatgcaaaagtgtgatggtgttaatgaaattgaagatggtcag
aaagtcagagcagaggtaattcaaaagcttttacgaattcacttggaaaattgccagtcc
acctccgattccctatgtgagcttgcctgctctgttttgccccaggtttcattacacaga
tctgcattggaggatcactgtcgtttttctactctctgtcctgcaacattttacatttgg
taccgggtactgcatgaagagaaccttgccatgattaaccgcttgataaaggaaatttca
cttctggagaaagccaggggtggtgaagtggaagatgtcaaatgccttctgaagaaacta
caacaatctgttaatgtggttgtttctttagtcaatttgtgcaagacccatgataaggtc
aacgtccgtgcaattgctgtcaagtttggtgggaagtttgttgactctttcctcaaagct
tttggcttcttacaggggcaatttgaattgcaccgtgagcaaataattcagatggttaga
gagcttcagacagcaactagaactatccagacgctttgttcagacgcaaagggcatgaaa
caaacagcaataaccagcaaaatccccatcaccaagagatctatggagcggttcttattt
cgtgttaaggaacttcttcactcgacatcaagtggatgcaccttttggatgggcaatctg
aagcataaaaatttgatgggggatgtagttagctcccaagcatatgtagatgatcaaaaa
gacaatatggacaatgtttcgacagaaaatatggatatagatgaacccgcagatattgct
ggtgaatga
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integrated database retrieval system