Solanum lycopersicum (tomato): 101251564
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Entry
101251564 CDS
T02665
Name
(RefSeq) poly(ADP-ribose) glycohydrolase 1-like isoform X1
KO
K07759
poly(ADP-ribose) glycohydrolase [EC:
3.2.1.143
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
101251564
Enzymes [BR:
sly01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.143 poly(ADP-ribose) glycohydrolase
101251564
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Gene cluster
GFIT
Motif
Pfam:
PARG_cat_C
PARG_cat_N
AKAP_110
Motif
Other DBs
NCBI-GeneID:
101251564
NCBI-ProteinID:
XP_004253043
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Position
12:67653645..67659917
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AA seq
562 aa
AA seq
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MENREDLKSILPFLPFSLRSSSLFWPAPVTEALTDISKGPNHSKIDSGEGLFIAISDIRN
SLSFHSFSIDTSASQGFALFFDDLLPRDEAAKWFEEVVPQLAKLLLRLPLLLETHYENAD
DGVLKGVKTGLRLLESQEPGIVFLSQELIGALLACALFCLFPTSHRGAKHLPMINFDHLF
ACLHDHYEEAFDNKLKCIVHYFGRICSSMPAGYVSFERKVLSLQFSPSCIPYPKEKLWSQ
SNISLCHYEISVSGLIEDQSREAIEVDFANMYLGGGALVRGCVQEEIRFMINPELIAGML
FLPCMADNEAIEIVGTERFSSYTGYASSFRFNGDYVDKKDIDVLGRRKTRIVAIDALCCP
GNNQYRLEGLLREINKAFCGFMDQCKCHQYQQLFKDDQTVNSTGGRSIVNLLSLGHTSTS
SQATEGASGNHLARNHKGHRCPPLDSQQEIGVVTGNWGCGAFGGDPQLKAMLQWIAASQA
MRPFILYYTFGLEALQMLEQVIQWIVSHKWTAGELWNVLVEYSSQRLREETRVGFFNWLL
PSLSSHDDMLNDSYDDRTCSCC
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggagaacagagaagacttgaagtcaattcttccatttttacccttttcactccgatca
tcttcacttttttggccggcgccggtaactgaagcacttaccgatatctcgaaaggtcct
aatcacagcaaaattgactccggcgaaggcctattcatcgccatttccgatattcgaaac
tctctctcgttccacagtttttcaattgatacttctgcttctcaaggttttgctctgttc
ttcgatgatttgcttcctagggatgaagctgcaaaatggttcgaagaagtggtaccacaa
ttggctaagttgcttttgagattgcctttattgctagaaactcattatgagaatgctgat
gatggagttttgaaaggagttaaaaccggtcttcgcttgttggaatcacaagagcctggc
attgtcttccttagtcaggaactaattggtgctcttcttgcatgcgcgttgttttgtcta
tttcctaccagtcatagaggtgccaaacaccttccaatgatcaactttgatcacttattt
gcgtgtctacatgatcattatgaagaagcattcgataataaattgaagtgcattgttcac
tattttgggaggatatgttcatctatgccagcaggctatgtgtctttcgagcgaaaagtt
ctttctttacaatttagtccatcttgtattccttatccaaaggaaaaattatggagccaa
tccaatatttccctttgtcattatgagatttctgtttcaggattaattgaagatcaatca
cgtgaagctattgaagttgattttgctaacatgtatttaggaggtggtgctctcgttagg
ggctgtgtgcaggaagaaattcgatttatgatcaatccagagttaatcgctggcatgctt
ttcctgccgtgcatggcagacaatgaagctatagaaattgttggtacagaaaggttttca
agttataccgggtatgcctcttcattccggtttaatggtgactatgtcgacaaaaaggac
attgatgttcttggaaggcgtaagactaggatagttgcaatagatgcactgtgctgcccg
ggaaacaaccagtaccgacttgaaggccttctaagggagattaataaagcgttttgtggc
ttcatggatcaatgcaaatgtcatcagtatcaacagctcttcaaagatgatcaaactgtt
aactccaccggtgggaggtccattgttaatcttctgtcacttggtcatacttcaacttca
tctcaagcaaccgagggagcatcggggaatcatttagccagaaatcacaaggggcaccgt
tgtccacctttagacagtcagcaggaaattggtgttgtgactggaaattggggttgtggt
gcttttggaggagatcctcaacttaaagcaatgcttcaatggattgctgcatctcaggca
atgagacctttcatcttgtattatacatttggactggaagcattgcagatgctggagcag
gtgattcaatggattgtttcacataagtggactgcaggggagctttggaatgtgttggtg
gaatactcttctcagagattgagggaagaaactagagtaggcttcttcaattggctcctt
ccatcattgtcttctcatgatgacatgctcaacgattcctatgatgatcggacatgttca
tgctgttaa
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