Solanum lycopersicum (tomato): 101251680
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Entry
101251680 CDS
T02665
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''beta isoform X2
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101251680
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sly01009
]
101251680
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sly03019
]
101251680
03036 Chromosome and associated proteins [BR:
sly03036
]
101251680
Protein phosphatases and associated proteins [BR:
sly01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
101251680
Messenger RNA biogenesis [BR:
sly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
101251680
Chromosome and associated proteins [BR:
sly03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
101251680
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
DUF4187
P2R3B_EF-hand
Motif
Other DBs
NCBI-GeneID:
101251680
NCBI-ProteinID:
XP_004239749
UniProt:
A0A3Q7GKX2
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Position
5:complement(65607661..65617904)
Genome browser
AA seq
539 aa
AA seq
DB search
MDVDLIGDLARLDAELLQLPDVSSFAIKDNPFVAQKLFDQWLSLPDTAPLVKNLLNNAKA
GGPLSATGASSSTNVATSSSLPSMFPAGSTPPLSPRSSSGSPRTTRPRAGPSMLGSPLKL
VNEPVKELIPQFYFQNGRPPTNELKERCLFRINQFFYGHTDGLQMDEFKPITKEICKLPS
FFSTVLFRKIDVGQTGIITRDVFVDYWVNGNMLTKDIATQIYTILKQPDLKHLIQDDFKP
VLRDLLATHPGLEFLRNTPEFQERYAETVIYRIFFYVNRLGDGHLTLRELKRSDLIAAMQ
HADEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYGNHALTYRIVDRIF
SQVPRKFTSKVEGKMGYEDFVYFILSEEDKTSEPGLEYWFKCIDLDGNSILTRNEMQFFY
EEQLHRMECMGQEPVLFEDILCQMVDMINPEDQSYFALRDLKGNKLSSSVFNVLFNLNKF
MAFETRDPFLIRQERENPNLTEWDRFAHREYIRLSMEEDAEDASNGSADVWDESLEAPF
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggatgtggatttaattggtgatttagcgaggcttgatgctgaactgttgcagcttcct
gatgtttcgtcgtttgctatcaaggataacccttttgttgcccagaagctgtttgatcaa
tggctatcgctcccggacacggcacctttggtgaaaaatttgcttaataatgctaaagct
ggtggacccttgagcgcgactggagcttcttccagcacaaatgtagcgacaagcagttct
ttgccgtctatgtttccggctggaagtacccctccgctttccccaagaagttcatctggt
tcgccgcggacaacgagacccagggcaggcccctctatgttaggatcccctttgaaatta
gtgaacgagcctgttaaggagctaataccacagttctattttcaaaatggccgtccacct
acaaatgaattgaaggaacgctgcttgtttagaataaaccagtttttctacggtcacacg
gatggactacaaatggatgaattcaaaccaattactaaggaaatatgcaagttgccatcg
ttcttctccactgttctttttaggaagattgatgttggtcaaacaggcatcataacaagg
gatgtctttgttgattactgggtcaatggaaacatgttgacaaaagatatagcaacccaa
atttacacaatcttgaagcagccagatctcaaacacctgatacaggatgatttcaagcct
gttcttcgagatcttttggcaacacatcctggtttagagttcttacggaacactcccgaa
tttcaagagcgatatgctgaaactgtaatatacagaatatttttctacgtgaatagattg
ggtgatggtcatcttaccctcagggagctgaagcgttctgacctaattgctgcaatgcaa
catgcagatgaagaagaagatattaacaaggtccttagatacttttcttacgaacacttt
tacgtgatatattgcaagttttgggagctcgatactgatcatgattttctgattgataaa
gagaacctcattcgatatggcaatcatgcccttacgtacaggatcgttgatagaatattt
tctcaggttccgaggaagtttacaagtaaagttgaaggaaagatgggttatgaagacttc
gtttactttatattatcagaggaggataaaacgtcagagcctggtcttgagtactggttc
aaatgcatagatttggatggaaatagtattctgactaggaatgagatgcaattcttttat
gaggagcagttgcatagaatggaatgcatgggccaagagccagtgctttttgaggatatt
ttgtgccagatggttgacatgattaatccagaggatcaaagttattttgcattacgcgac
ttgaagggaaataaactatccagcagtgtttttaatgttctctttaaccttaataagttc
atggcatttgaaacccgcgacccgttccttatacgtcaagaacgcgagaatccgaatttg
accgagtgggatcgctttgcacacagggaatatattagactctcaatggaggaagatgca
gaggatgcctccaatggaagtgcagatgtctgggatgaatcacttgaggcgcctttttaa
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