Solanum lycopersicum (tomato): 101251766
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Entry
101251766 CDS
T02665
Name
(RefSeq) probable polygalacturonase At1g80170
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly00040
Pentose and glucuronate interconversions
sly01100
Metabolic pathways
Module
sly_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101251766
Enzymes [BR:
sly01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
101251766
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Phage_phiJL001_Gp84_N
Motif
Other DBs
NCBI-GeneID:
101251766
NCBI-ProteinID:
XP_025885852
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Position
3:complement(60239112..60242013)
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AA seq
394 aa
AA seq
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MVIMKMLISIFVASLLPSLIYSAPDFPVFNVVDYGAVGDGLTDATNAFIKTWEATCTSSF
SSPIMYVPSENTFLLHPIKLEGPCVSAGLTVEINGNITAPREPSRWRCYDKRCDKWIHFK
HANGLTVRGNGTINGRGYNWWNVNDRLRPTAFEISHSENISLTGLRFIDSPRMHVHFEKS
KSARVTNITIDAPGESPNTDGIHVSGSSDVIIDHCQIGTGDDCISIVDGCSHLNISNIIC
GPGHGISIGSLGKHGSNDNVEDIFVSDVLFISSTNGARIKTWQGGKGHASNIIFERIRTQ
DSYNPIIIDQFYCDGEYCTEHDSAVKVSNVTFRHVQGTSQGEFAVKLDCSASVPCTGIVL
EDIDIRSGYENQARVYTSNVQGIVMGLTIPQTHF
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggtcattatgaagatgctaatctcaatctttgttgcttcgcttctgccttcactgatt
tattcagctccagattttccagtctttaatgttgttgattatggtgcagttggtgatggc
ttaaccgatgcaaccaatgctttcatcaaaacatgggaagcaacatgtacatcatcgttt
tcttctccgataatgtacgtaccttctgaaaatacgttcttgcttcatcctataaaattg
gagggcccttgcgtatcagcaggcctcactgttgagataaacggaaatataactgcacct
agagaaccttcgagatggaggtgttacgacaaacgttgtgataagtggatccattttaaa
catgccaacggccttacggtacgtgggaatggaacaattaatggtcgtggatacaattgg
tggaatgtaaatgaccgcctgaggccaactgcttttgaaatttcacattcagaaaacatc
agtctaacgggactgagatttatcgatagccctcgcatgcatgttcattttgagaaatcg
aaatctgccagagtcacaaacataaccattgatgcaccaggagagagtcctaatactgac
ggtattcatgtttcaggcagcagcgatgttatcattgatcactgtcaaattggaactgga
gatgattgtatctcaattgttgatggatgttcccatctgaatatcagcaacataatatgc
ggaccaggacatggtataagtattggaagtctaggcaagcatggatctaatgacaatgtt
gaagacatttttgttagtgatgtcctgttcataagttctacaaatggtgctcgaattaag
acatggcagggaggcaaaggtcatgctagtaacataattttcgagagaataaggacgcaa
gattcgtataaccctattattatcgatcaattctattgtgatggggaatattgtacagaa
catgattcagcagtaaaggttagtaatgttacttttagacatgtacaaggaacatcccaa
ggggaatttgctgtgaagctggattgcagcgcgtcagttccctgtacgggtatagtattg
gaggacatagatatccgttcaggttatgaaaatcaggctagagtatatacgagtaatgta
caaggaattgttatgggtctaaccattcctcaaactcacttttga
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