Solanum lycopersicum (tomato): 101251771
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Entry
101251771 CDS
T02665
Name
(RefSeq) serine/arginine-rich splicing factor SC35 isoform X1
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101251771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sly03041
]
101251771
Spliceosome [BR:
sly03041
]
Common components
Common spliceosomal components
SR proteins
101251771
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
101251771
NCBI-ProteinID:
XP_004237903
UniProt:
A0A3Q7H017
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Position
4:61866095..61872053
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AA seq
258 aa
AA seq
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MSHFGRSGPPDIKDTYSLLVLNVTFRTTADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFA
FVRYKYQDEAQKAVEKLDGRVVDGREIMVRFAKYGPNAERIDKGRILEPVQRPKGRSRSR
SPRPRHRDHRDKDSRRRSRSRSRSRSRGRYERDQYRGRDRDNRHRSRSRSPDYHRGRGRG
KYDEDRRSRSRSHGRSASPARRSPSPRRSPSPRRTTPPRDASPDGRNHKDRSPTPKSISP
RGRRAGSRSPLPRSDADD
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacttcggtagatcaggcccaccggacatcaaagacacctactctctgctcgtt
ctcaacgttacttttcgtaccactgctgatgacttgtttcctctatttgataagtatgga
aaagtagtcgatgtctttatccctagagaccgaaggactggagattctaggggttttgca
tttgtgcgctacaagtatcaggatgaggctcaaaaagcagtggaaaagcttgatggaaga
gttgtagatggtcgggaaatcatggttcgatttgcgaagtacggccctaatgctgagaga
attgacaaaggtagaattttggagcctgtacaaaggccaaaagggaggtcaagaagccgc
agtcctagaccaaggcatcgtgatcatagggacaaggattctagaaggagaagccgaagt
agaagtagaagtagaagtaggggaaggtatgagcgtgatcagtaccgtggaagagacaga
gataaccgtcatcggagcagaagccgcagccctgattaccacagaggtcgtgggagaggt
aaatatgatgaggacaggcgcagccgaagtcggtctcatggaagaagtgcctcccctgct
cgccgtagccccagtcctcgaaggagcccttctccacgaagaacaactcctcccagggat
gctagtccagatggacgtaatcacaaggaccggtctccaactccaaagagtatatcacct
cggggtagacgtgctggttctcgcagccccttgccacgttctgatgctgatgattga
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