KEGG   Solanum lycopersicum (tomato): 101251944
Entry
101251944         CDS       T02665                                 
Name
(RefSeq) splicing factor U2af large subunit A isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sly00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101251944
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sly03041]
    101251944
Spliceosome [BR:sly03041]
 Complex A
  U2 snRNP components
   U2 related factors
    101251944
 Complex B
    101251944
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 101251944
NCBI-ProteinID: XP_004232384
LinkDB
Position
2:64705318..64711535
AA seq 558 aa
MQEYEGNGEDIENNGSSPYSDSKSQHTSRDPEKERGSSRSREKEREKGRDKDRDRDRNRD
RDRDRDRGKERDKDRDRDREREKDRDRHHRDRHRDRSDRRERIRDRDEDDLQRTRDYDRR
RDNDKDREDRQRHKPSSRGRSEHRSRSRSRSPSKSKRISGFDMAPPTSALLSGATDVAGQ
VPGTTNPSIPGMFSNMFPLAAGQFGALPIMPVQAMTQQATRHARRVYVGGLPPTANEQSV
ATFFSHVMYAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGVIFEGGPV
KVRRPSDYNPSLAATLGPSQPSPNLNLAAVGLTPGSSGGLEGPDRIFVGGLPYYFTESQI
RELLESFGQLRGFDLVKDRETGNSKGYAFCVYQDVSVTDIACAALNGIKMGDKTLTVRRA
NQGTTQPNPEQESVLLHAQQQIALQRFMLQPGALATKVLCLTEVVSVDELKDDDDYQDIL
EDMRIECGKFGALLNVVIPRPNPNGEPTPGLGKVFLEYADVDSSSKARQGLNGRKFGGNQ
VIAVFYPENKFSEGDYEA
NT seq 1677 nt   +upstreamnt  +downstreamnt
atgcaggaatatgaaggtaatggagaagatatagagaataatggttcttctccttacagt
gactccaagtctcagcatacttctcgtgaccccgagaaagaaaggggctcatcaagaagc
agggagaaggagagggagaaagggcgtgataaagaccgggacagggacaggaatagagat
agagatagagacagggacagaggtaaggaaagggacaaagatagggatagggacagagag
agggagaaggaccgtgatcgtcatcacagagatcgtcatagggatcggagtgataggagg
gagaggatcagagatcgagatgaagatgatcttcagcgaactcgagattacgataggcga
agagacaatgacaaagatagagaggaccgacagagacacaagcctagctctaggggtaga
tccgagcatagatcaaggtctagatcacggtcaccatctaagagcaaaaggatcagtggt
tttgatatggcacctcccaccagtgcattgctatctggcgctactgatgttgcaggtcaa
gttcctgggaccactaacccatcaatacctggaatgttttctaacatgtttcctctagca
gcaggccagtttggagctctccctattatgccagtccaggcaatgacacagcaggctacc
agacatgctcggcgagtttatgttggtggacttccgcctactgcaaatgaacagtcggtt
gctaccttctttagtcatgtcatgtatgcaatcggaggaaatactgctggtccaggggat
gctgttgtcaacgtttatataaaccatgagaagaagtttgcctttgttgaaatgagatct
gttgaggaagctagtaatgcaatggctttggatggtgtcatttttgagggcggaccggtt
aaggttagaagacccagtgattacaatccttccttggcagctacacttggtcctagtcaa
ccgagccccaacctcaacctggcagctgttggattgacaccaggttcttccggagggctt
gaaggacctgaccgtatatttgttggtggtttaccctattattttacagaatcacaaatc
agggaacttttagagtcttttggtcaacttcgaggatttgatctggtcaaagatagagaa
actgggaattcaaaaggttatgctttttgtgtgtaccaggatgtctctgttactgatatt
gcttgtgcagctcttaatgggattaagatgggggataaaactcttactgttaggcgggct
aaccagggcacaacccaacccaaccctgagcaagagagtgtattgttgcatgcacaacag
cagatagctttgcagaggttcatgttacaacctggtgcattagccacaaaggttttgtgc
ttgacagaagtggttagcgtagatgagctcaaagatgatgatgactatcaagatattttg
gaagatatgaggattgaatgtggtaaatttggagctctcctgaatgttgtcattccacgt
ccaaatcctaatggcgagcctacacctggactcgggaaggtattcctggagtatgcagat
gttgacagttccagcaaagctcgccaagggctgaatggaagaaaatttggtggtaaccaa
gttattgctgtcttctatccagagaacaagttctctgagggagattacgaggcttaa

DBGET integrated database retrieval system