Solanum lycopersicum (tomato): 101252048
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Entry
101252048 CDS
T02665
Name
(RefSeq) mtDNA-binding protein WHIRLY2-like
KO
K26561
single-stranded DNA-binding protein WHY2
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sly03400
]
101252048
DNA repair and recombination proteins [BR:
sly03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
101252048
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Whirly
Motif
Other DBs
NCBI-GeneID:
101252048
NCBI-ProteinID:
NP_001315334
UniProt:
A0A3Q7JMC9
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Position
11:38044642..38048857
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AA seq
240 aa
AA seq
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MLKVSRLLHPRHIRNQLLHKKLSGEDVKGSIWQNAINTFAAFSTVRQDVVADGKREGRVF
APYSVFKGKAALSAEPRLPTFNRLDSGGVKLNRRGVIMLTFWPSVGERKYDWEKRQLFAL
SATEVGSLISMGTRDSSEFFHDPSMLSSNAGQVRKSLSIKPNADGSGYFVSLSVVNNNLK
TNDRFTVPVTTAEFAVMRTAFSFALPHIMGWDRFTNRPSESISQSPSKVVPQLMEAEWDR
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaagtcagtcggcttctgcaccccagacacattaggaatcagttgttgcataaa
aaattgtctggagaggatgtcaaaggttctatctggcagaatgccatcaacacttttgca
gccttttctactgttcgacaggatgttgtggctgatggaaaacgggaaggtcgagtgttt
gctccctactcagtatttaaaggcaaagcagcactttctgctgaacctaggctgcccaca
tttaatagactggattctggaggtgttaaactcaatcgtcgaggtgtcattatgttgaca
ttctggccatccgttggtgagcgcaaatatgactgggaaaagaggcagttgtttgcttta
tcagcaacagaggttggatcattgataagtatggggaccagagattcttctgaattcttt
catgatccttcaatgctgtctagtaatgctggtcaagttagaaagagtttgtcaattaag
ccaaatgctgatgggagtggttatttcgtttcattgagtgttgttaacaataatctcaaa
accaatgatcggtttactgttcctgtcactactgccgaatttgctgttatgcgaacagct
ttcagttttgctttgcctcacatcatgggatgggatcgcttcactaatcggccttcagaa
agcatctctcaaagtccctcaaaggtggttccacaactaatggaggcggagtgggataga
tga
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