Solanum lycopersicum (tomato): 101252241
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Entry
101252241 CDS
T02665
Symbol
SQS4
Name
(RefSeq) squalene synthase-like isoform X2
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly00100
Steroid biosynthesis
sly00909
Sesquiterpenoid and triterpenoid biosynthesis
sly01100
Metabolic pathways
sly01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
101252241 (SQS4)
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
101252241 (SQS4)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sly01006
]
101252241 (SQS4)
Enzymes [BR:
sly01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
101252241 (SQS4)
Prenyltransferases [BR:
sly01006
]
Terpene biosynthesis
Squalene/phytoene synthase
101252241 (SQS4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
101252241
NCBI-ProteinID:
XP_004249733
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All DBs
Position
10:complement(59847130..59852110)
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AA seq
412 aa
AA seq
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MGFMQEILMHPDELYPLIKLMLSVKRVENKTSVWLLQPHWAFCYATLRKVSRSFALVIQQ
LPSDLRNVVCVYYLVLRALDTVEDDTSLAIEVRVPILRNFYCNFYDPQWNFSCGTKAFKV
LMDQFHHVSTAFLELDTNYQEVIKDITKRMGEGMAKFLCKEVETIDDYNEYSFYASGLCG
LGLSKFFYVSGREDLAPESISISMGLFLQKISIIRDYLEDINEVPKCRMFWPRQIWSKYV
NKLEDFKYEENSVMAVQCLNEMVTNALLYVEDCLTGMSSLRNPAIFHFCAIPQIINMGNL
SMYYNNVEIFKGVVEMRRGLCAKIIDQTRTMADVYGAFYDFCCIMESKVDRDDPNATITL
KRLEAILKTCRDSGTLNQRKSHTFSHQPNYNIPVLIIFFFIMMAVLLSTTIH
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggggtttatgcaagagattttgatgcatccagatgaattatatccattgataaaactc
atgttatcggttaaacgcgtagagaataagacatcagtgtggctgttgcagccacactgg
gccttttgctacgctactctccgaaaggtgtctcgtagctttgctcttgttattcaacaa
cttcctagtgacctacgtaacgtggtttgtgtttactatttggttcttagagcacttgat
actgttgaggatgataccagcttagctattgaggttagagtacctattttgagaaatttt
tattgcaacttctatgatcctcaatggaatttttcatgtggtacgaaggccttcaaagtt
cttatggaccaattccatcatgtttccactgcttttctagagcttgatacaaattatcaa
gaggtgattaaggatataacaaagaggatgggtgaaggaatggcgaaatttctatgcaaa
gaggtagaaacaatcgatgattataatgaatatagtttctatgcatctggactatgtgga
ttaggattgtcaaagtttttttatgtttctggaagagaagatttagcaccagaatccatc
tcgatttccatgggtttatttcttcagaaaataagcatcattagagattatctagaggac
ataaatgaagtacctaaatgtcgtatgttttggcctcgtcaaatttggagtaaatatgtt
aacaaactcgaggattttaagtacgaggaaaactcggtcatggcagtacaatgtctgaat
gaaatggttactaatgctttattgtatgtagaagattgtctgactggcatgtctagttta
cgcaatcctgctatctttcatttctgtgcaattccacagattataaatatggggaatttg
tcgatgtactacaacaacgttgagattttcaaaggcgttgttgaaatgagacgaggcctc
tgtgctaagattattgatcagacgaggacaatggctgatgtctacggagctttttatgac
ttctgttgtataatggaatctaaggttgatcgcgatgatccaaacgcaacgattactttg
aagagacttgaagcaatcttgaaaacttgcagagactccggaaccttaaatcaaaggaaa
tctcacacattcagccatcagcctaattataatattccagttttgattatcttctttttc
atcatgatggctgttcttttatcaacaacaatacattaa
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