Solanum lycopersicum (tomato): 101252328
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Entry
101252328 CDS
T02665
Name
(RefSeq) pre-mRNA-splicing factor SLU7
KO
K12819
pre-mRNA-processing factor SLU7
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101252328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sly03041
]
101252328
Spliceosome [BR:
sly03041
]
Complex C
Other components
Step II factors
101252328
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slu7
CrtC
Motif
Other DBs
NCBI-GeneID:
101252328
NCBI-ProteinID:
XP_004247521
UniProt:
A0A3Q7I625
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Position
9:complement(62364990..62371382)
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AA seq
536 aa
AA seq
DB search
MATASGAFKSREDHRKQLELEEARKAGLAPAELDEDGKEINPHIPQYMSSAPWYLNAERP
SLKHQRNWKSDPNYTKSWYDRGAKIYQADKYRKGACENCGAMSHDTRSCMERPRKLGAKW
TGKHIAPDEKIEQFELDYDGKRDRWNGYDAASYAHVIERYEARDEARRKYLKEQQLKKLE
EKNNKDDKEGGDSDNEDCEDALKVDEAKVDESKQMDFAKVEKRVRTTGGGSTGTVRNLRI
REDTAKYLLNLDVNSAHYDPKTRSMREDPLPDMDPNEKFYAGDNQNRVSGQALEFKQLNI
HAWEAFDKGHDVHMQAAPSQAELLYKNFKINKEKLKVQTKDDVMEKYGNAASEDTLPREL
LLGQSEKEVEYDRAGRIVKGQEMSLPRSKYEEDVYINNHTTVWGSWWKDHQWGYKCCKQT
IRNSYCTGAAGIEAAEASAGLMKANIARKEAAEDTHVPVEEKRQATWGTEVPEDLILDQK
KLTEAIKKEEERRREEKDERKRKYNVKYNDEVTPEEMEAYRMKRVHQDDPMKDFLH
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggctaccgcatcaggtgcatttaaatctagggaggatcacaggaaacagttggaattg
gaagaagcaagaaaggctggtcttgctccggctgagttggacgaagatggaaaagagatt
aatcctcatattcctcagtatatgtcttccgctccttggtaccttaatgcagaaagacca
agtttgaaacatcaaaggaactggaaatcagaccctaattacacaaaatcatggtatgac
agaggtgcgaagatatatcaggctgacaagtataggaagggtgcatgtgaaaactgtgga
gcaatgtcccatgacactaggtcatgtatggaaaggccacgcaaactgggagcaaaatgg
acagggaaacacattgctcctgatgagaagatagagcagtttgagctggactatgatggt
aaaagggatcgttggaatggttatgatgctgcttcttatgcccacgtcattgaacgatat
gaagcaagggatgaagcaagaaggaaatacctcaaagagcaacaacttaaaaaattggaa
gaaaaaaataacaaggatgacaaagaaggaggtgatagtgacaatgaggattgtgaggat
gctttgaaggtagacgaagcgaaggttgatgaaagcaagcaaatggattttgccaaagtt
gagaagcgtgtgcggaccactggtggtggtagcacagggactgttaggaacctgcgtatt
cgggaggatacggctaaatatcttctcaatcttgatgtaaattcagcacactatgatccc
aaaacacggtccatgcgtgaagatcctcttcctgatatggacccgaacgaaaagttctat
gctggcgataaccaaaacagagttagtggtcaagcattggagttcaagcagcttaatatt
catgcctgggaggcttttgataagggtcatgatgttcatatgcaagcagctccatcccag
gcagaattgctctacaaaaattttaagattaacaaggagaaattgaaggtgcaaactaag
gatgatgtcatggagaagtatggcaatgcagctagtgaggacacacttccaagagaactc
ctactgggtcaaagtgagaaagaggttgaatatgatcgtgctggtaggattgtgaaggga
caggagatgtcacttcctagaagcaaatatgaagaggatgtttacatcaataaccacacc
actgtttggggttcatggtggaaagatcaccaatggggttataagtgctgcaaacaaaca
atcagaaatagctattgtactggtgctgctggaattgaagcagcagaagcctctgctggt
cttatgaaagccaacattgctcgtaaggaggctgctgaagatacacatgtgcctgtcgag
gagaagaggcaagctacttgggggactgaagtaccggaagatctgatactagaccagaaa
aagctcactgaagctataaagaaggaagaggagaggagacgagaagagaaagatgaacgg
aagaggaaatataatgttaaatataatgatgaggttacacctgaagaaatggaggcatat
aggatgaagcgggttcaccaagatgatccaatgaaggacttccttcactga
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