Solanum lycopersicum (tomato): 101252411
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Entry
101252411 CDS
T02665
Name
(RefSeq) scarecrow-like transcription factor PAT1
KO
K27748
scarecrow-like transcription factor PAT
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sly03000
]
101252411
Transcription factors [BR:
sly03000
]
Eukaryotic type
Other transcription factors
GRAS
101252411
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GRAS
AF_0155
Motif
Other DBs
NCBI-GeneID:
101252411
NCBI-ProteinID:
XP_004243547
UniProt:
A0A3Q7HA70
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Position
7:61436868..61440712
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AA seq
545 aa
AA seq
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MQASRRRRTTMSNMLYCEPVQKAEAYYLPQFQTLESHLSCINGSLGGNHSFQTYHDRYCM
LEASSATGSNAVYHSPSTASFSSNGSTTCNQESQLYLSDVRQSPETTNYGSPISGSCITD
DVTDFMHKLKELETAMLGPDADFQESYDNSLASSIASSEIDSWRQMMLAIPRRDLKQVLI
ACAKAVSDGELVTAQVLISELRQMVSVSGEPIQRLGAYILEGLVARLGASGSSICKSLRC
KEPASFELLSYMHVLYEICPYFKFGYMSANGAIAEAMKDENRVHIIDFQIAQGSQWVPMI
QAFAARPGGPPHIRITGIDDSTSAYARGGGLDIVGQRLSKLAKTFKVPFEFHPAAMSGSD
IQLKNLGIQPGEALAVNFAFTLHHMPDESVSTENHRDRLLRMVKNLNPKVVTLVEQESNT
NTAAFFPRFLETLDYYSAMFESIDMTLPRGHKERINVEQHCLARDVVNIIACEGIERVER
HELLGKWKSRFRMAGFNPYPLSSLVNATIKTLLESYSDKYRLEERDGALYLGWMNRDLVA
SCAWK
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcatcacggcgcagaagaacaaccatgtctaatatgctttactgtgaacctgtg
cagaaggcagaggcctactatctgcctcagtttcaaactttagaaagccatttgagctgc
attaatggcagccttggaggtaatcactccttccagacttatcatgaccgctattgcatg
ctggaggcgtcttctgccactggaagcaacgctgtttaccactcaccatcaactgctagt
ttctcatcaaatggaagcacgacgtgcaatcaagaatctcagctgtacctgtcagatgtt
cgtcagtcccctgagacaactaactatggctcacccataagtggatcttgtattacagat
gatgtgactgatttcatgcacaagctaaaggaattggaaacagctatgctgggacctgat
gcggacttccaggagagttatgataattccttggcaagcagtatagcttcctcagaaatt
gatagctggaggcaaatgatgttggccatacctagacgggatttgaaacaggtgcttatt
gcttgcgcaaaagcagtttctgatggtgaattagtaactgcacaagtgttgatatctgag
ttgcgtcaaatggtatcagtgtcaggggaaccaattcagagactgggagcatacatcttg
gaagggcttgttgcaaggttgggtgcatcaggaagttccatatgcaaatccttgagatgc
aaagaacccgcaagttttgagctgttgtcttatatgcacgttctttacgagatttgccct
tacttcaaatttggatacatgtcagctaatggtgccattgcagaagcaatgaaggacgaa
aatagagtccatataattgattttcaaattgctcaagggagccagtgggtgcctatgatc
caagcttttgcagctcgtcctggaggacccccacatatccgcataacaggcattgatgat
tccacctcagcatatgctcgtggaggaggccttgatatcgtggggcagaggctttccaaa
cttgctaaaactttcaaggttccttttgagtttcatcctgctgccatgtcgggttctgat
attcagctaaaaaaccttggaattcaacctggagaagcactagcagtaaattttgctttc
acattacatcacatgccagatgaaagtgtgagcactgaaaatcatcgggatagactatta
cggatggtcaaaaacctcaaccccaaggtggttacccttgttgagcaagaatctaataca
aatactgctgctttctttcctcgatttcttgaaaccttggattattattcagccatgttt
gaatcaatcgatatgactcttccaaggggacacaaggagcgcatcaatgttgagcagcat
tgtttggcgagggacgttgttaacatcatagcatgtgaagggattgaaagggtagaacga
catgaacttcttggtaagtggaagtcgcggtttagaatggctggttttaacccataccca
ttgagttcattggtgaacgctacgatcaagacattgctagagagctactctgataagtat
aggcttgaagaaagagatggtgctctttaccttggttggatgaacagagatttggttgct
tcttgtgcctggaaataa
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integrated database retrieval system
