Solanum lycopersicum (tomato): 101252435
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Entry
101252435 CDS
T02665
Name
(RefSeq) uncharacterized protein isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sly04131
]
101252435
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sly04812
]
101252435
Enzymes [BR:
sly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
101252435
Membrane trafficking [BR:
sly04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
101252435
Cytoskeleton proteins [BR:
sly04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
101252435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_5
RuvB_N
AAA_22
AAA_16
AAA_14
NPHP3_N
TIP49
Vps4_C
Mg_chelatase
DUF815
AAA_2
AAA_25
RNA_helicase
nSTAND3
AAA_24
IstB_IS21
MCM
AAA_7
bpMoxR
AAA_28
MIT
AAA_17
ABC_tran
AAA_33
Guanylate_kin
AAA_30
PhoH
Parvo_NS1
AAA_18
nSTAND_NTPase5
NACHT
Sigma54_activat
Motif
Other DBs
NCBI-GeneID:
101252435
NCBI-ProteinID:
XP_010326163
UniProt:
A0A3Q7EKP6
LinkDB
All DBs
Position
1:81491740..81501999
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AA seq
491 aa
AA seq
DB search
MSFLKDLAETLSSIFSDTPSSPSSLNHPQENSGDRTMDGVATGNERTAYKLKGYFELAKE
EIAKAVRAEEWGLADEAIAHYHNSQKILAEGISTPVPSYIASSEHEKVKSYRQKISKWQS
QVSDRLQTLSRRAGGTPSVKQSEPQSQRVAVSQSSSSARKGASLSAPSSGKVSSATRVPS
NRISSHKPSQESATADGSDPKLVEMINSVIVDRSPSVKWEDIAGLEKAKQALLEMVILPT
KRKDLFTGLRKPARGLLLFGPPGTGKTMLAKAVASESQATFFNVSASSLTSKWVGEGEKL
VKTLFMVAISRQPSVIFMDEIDSIMSTRTTNENEASRRLKSEFLVQFDGVTSNSEGLVIV
IGATNKPQELDDAVLRRLVKRIYIPLPDASVRRQLLKHRLKGKAFSLPGGDLERLVRDTE
GYSGSDLQALCEEAAMMPIRELGANILSVQANQVRGLRYGDFQKAMTVIRPSLQKSKWEE
LEKWNQEFGAN
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagttttcttaaagacttggcagaaaccctaagctcgatcttctctgatactccatca
tcgccttcgtctctgaaccatcctcaggagaactccggtgatcggacgatggatggcgtt
gccaccgggaacgaacgcacggcgtataagctgaaaggctactttgaattggccaaagaa
gagatcgccaaagctgttagagctgaagaatggggcttggctgatgaagcaattgcacat
taccataattctcaaaagatactcgccgaaggcatttctactccggttccttcctatata
gcttctagtgaacacgagaaagtgaaatcatatcgtcaaaagatatcaaaatggcagtct
caagtttcagacagacttcagactctaagtcggcgagcaggtggcacaccttcagtcaag
cagtcagaaccacaatcccaaagagtggctgtttcacaatcaagttcgtctgctcgaaaa
ggagcatctctatctgcaccttcttcagggaaagtcagctctgctacgagggttccaagt
aatagaatatcaagtcataaaccttcacaggaatctgccactgctgatgggtctgatcca
aagttggttgagatgataaattctgtaattgtggatagaagcccgtctgttaaatgggaa
gatattgctggccttgaaaaggcaaagcaagctcttttagagatggtaattctaccaacc
aaaagaaaggacctcttcactggcttgagaaagcctgctagaggtctacttctttttggc
ccaccaggtactggaaaaaccatgcttgccaaagcagtagcatcagagtcacaagcaacc
tttttcaatgtgtctgcttcttcgttaacatcaaagtgggtcggagagggtgaaaagctt
gtcaagacattgttcatggttgccatttccaggcagccatctgtaattttcatggatgag
atagatagtattatgtcaactaggactaccaatgagaatgaagcaagcagaaggttgaag
tcagagtttctagttcagtttgatggggtgacatcaaattccgagggcctggtaattgta
attggtgcaacgaataagccacaggagttggatgatgctgttctaaggagattggtgaaa
agaatatatatacctctacctgatgctagtgttagaagacaacttctgaaacacagacta
aaggggaaagctttttctttgcctggtggagatctagaacgactggtgagagacacagaa
gggtattctggaagtgatcttcaagccttatgcgaggaggctgcaatgatgccaatcaga
gagcttggtgctaacattctctctgtccaggcaaatcaggtgaggggtttaagatatgga
gattttcagaaggccatgacagtgattaggcctagcctgcaaaagagcaagtgggaggag
cttgaaaagtggaatcaagagtttggtgcaaactaa
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