Solanum lycopersicum (tomato): 101252557
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Entry
101252557 CDS
T02665
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly00040
Pentose and glucuronate interconversions
sly01100
Metabolic pathways
Module
sly_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101252557
Enzymes [BR:
sly01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
101252557
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
101252557
NCBI-ProteinID:
XP_025884885
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Position
2:53928369..53929793
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AA seq
389 aa
AA seq
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MSPLAIFFLFLINSSLAANTNIYNVQNYGAKSDGETDSSEAFLSAWSAACASTSSSTIYV
PRGNYLIRNAYFNGKRCQSNAITIRIDGTLLAPSDYNAIGNEENWIKFEKVNGVSIYGGT
FDGQGASLWACKNSDYDDCPDGTTALNFYKSNNIIMSGVTVQNSQKFQISIDGCRNVKLQ
GLKVSAPGDSPNTDGIHVKLSSGVSIMKSQIGTGDDCISIGPGNSNLWIEGIACGPGHGI
SIGSLGWKKQESGVQNVTIKTVTFSGTTNGVRVKTWARPSNGFVRNVLFQHIVMVNVKNP
IIIDQNYCPNHQSCPHKGSSVKISDVTYQDIHGTSATKVAVKIDCSKRNPCSGITLEDLN
LSYNDHPTKASCINVSGRVSGLQKPDNCL
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgagtcccttagcaattttcttcctctttttaatcaactcatcattagcagcaaatacc
aatatttacaatgtccaaaattatggagcaaaatccgatggagaaactgattcatcagaa
gcctttttgagtgcctggtcagcagcctgtgcttctactagctcgtccactatttacgtg
ccacgtggaaattacttgattcgtaatgcatacttcaatggcaaacgatgccagagcaac
gctattactatacgcattgatgggactctcttagctccatctgattataatgcgattggc
aatgaagaaaattggataaaatttgaaaaagtcaatggcgtttccatatatggtggaacc
tttgatggtcaaggtgcttctctttgggcttgcaagaactccgactacgacgactgccct
gatggcactacggcattgaatttttacaaatcaaacaatattataatgagtggagtaacc
gtacaaaatagtcaaaagtttcaaatttcgatagacggatgtcgtaacgtaaagctacaa
ggactgaaggtatcagctccaggagatagtcccaacacagatggaattcatgtaaaatta
tcatcaggagttagtattatgaaatcacaaattggtactggagacgattgtatatccatt
ggccctggaaattctaacttatggattgaaggcattgcttgtggccctggccatggaata
agcattggaagcttaggctggaaaaagcaagagtcaggagtccaaaatgtgacaattaag
actgtgactttcagtggaacaacaaatggtgtgagagttaaaacttgggcaaggcctagc
aatggctttgttagaaatgttctgtttcaacatattgttatggttaatgttaaaaatcca
atcatcatagatcaaaattattgccctaaccatcaaagttgtcctcataagggctcaagc
gtaaagataagtgatgtaacatatcaagatatacacggaacatcggctacaaaagttgca
gtgaaaattgattgcagcaaaagaaatccatgtagcggcataacacttgaagatttgaat
cttagttacaatgatcatccgactaaagcttcatgtattaatgttagcggaagagtttct
ggtttacaaaaacctgacaattgcttataa
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