Solanum lycopersicum (tomato): 101252560
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Entry
101252560 CDS
T02665
Name
(RefSeq) probable beta-1,4-xylosyltransferase IRX10L
KO
K20870
putative beta-1,4-xylosyltransferase IRX10 [EC:2.4.2.-]
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sly01003
]
101252560
Glycosyltransferases [BR:
sly01003
]
Polysaccharide
Structural polysaccharide
101252560
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Gene cluster
GFIT
Motif
Pfam:
Exostosin_GT47
RXYLT1_C
Motif
Other DBs
NCBI-GeneID:
101252560
NCBI-ProteinID:
XP_010314238
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Position
12:59499141..59508153
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AA seq
416 aa
AA seq
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MRNWRWGFLLLLHFAFLLGTEAFKFHKTQRTERISGSAGDVLEDDPVGRLKVFVYELPSK
YNKKILQKDPRCLSHMFAAEIYMHRFLLSSPVRTLNPEEADWFYTPVYTTCDLTPNGLPL
PFKSPRMMRSAIQLIASNWPYWNRTEGADHFFIVPHDFAACFHYQEEKAIGRGILPLLQR
STLVQTFGQRNHVCLKDGSITIPPYAPPQKMQSHFIPPDIPRSIFVYFRGLFYDVGNDPE
GGYYARGARAAVWENFKDNPLFDISTEHPTTYYEDMQRAIFCLCPLGWAPWSPRLVEAVI
FGCIPVIIADDIVLPFADAIPWEEIGVFVDEKDVPNLDTILTSIPPEEILRKQRLLANPS
MKQAMLFPQPAQSGDAFHQILNGLARKLPHDRTVFLTPGQKILNWTAGPVGDLKPW
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgaggaattggagatggggttttcttttgcttcttcattttgctttcttgttaggaact
gaagccttcaaatttcataagactcaacgtactgagagaatctcaggtagtgctggtgat
gtcttggaagatgatcctgttgggaggttaaaagtttttgtatatgagcttcccagtaaa
tacaacaagaaaattcttcagaaagacccacgatgtctcagtcacatgtttgctgcagag
atctatatgcatcggttcctcttatctagccctgtacgaacccttaatcctgaggaagct
gattggttctacacccctgtttacaccacttgtgacctgacacctaatggccttccttta
cccttcaagtcaccacgaatgatgaggagcgcaatacaacttattgcttctaactggcct
tattggaataggacagagggtgctgatcacttcttcattgtcccacacgattttgctgct
tgttttcattatcaagaggaaaaagctattgggaggggaattcttccgttgctccagcgt
tcaactttagttcaaacttttggacaaagaaatcatgtgtgtttgaaggatggttcaatt
acaattcctccctatgctcctccacagaaaatgcaatcccacttcatccctccagatatt
ccgcgatccatctttgtttacttccgtggcttgttctatgatgtaggaaatgatccagaa
ggtggttattatgcgagaggtgcccgggcagcagtatgggagaactttaaggacaatcct
ctctttgatatttccacagagcatccaactacctactacgaggacatgcaacgagccatc
ttttgcttgtgcccacttgggtgggcaccatggagcccaagattggttgaagcagttata
tttggatgcatccctgttatcattgcagatgatattgtcttgccatttgctgatgcaatc
ccctgggaagagattggtgtttttgtagacgagaaggacgttccaaatttggatactatt
ctcacttctattccaccagaggaaatattgaggaagcagagattacttgctaacccttca
atgaaacaggctatgttgtttccacaacctgctcaatcaggtgatgctttccatcaaatt
ttgaatggacttgctcgtaaactgccacatgacagaaccgttttcttgactcctgggcag
aagatcttaaactggactgctggtccagttggtgacctaaaaccttggtaa
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