Solanum lycopersicum (tomato): 101252586
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Entry
101252586 CDS
T02665
Name
(RefSeq) peroxisome biogenesis protein 12
KO
K13345
peroxin-12
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
101252586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sly04121
]
101252586
Ubiquitin system [BR:
sly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
101252586
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pex2_Pex12
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
PRIMA1
zf-C3HC4
NinF
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
101252586
NCBI-ProteinID:
XP_004239752
UniProt:
A0A3Q7GKW6
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Position
5:67987521..67994472
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AA seq
393 aa
AA seq
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MLFQVGGQGTRPTFFEMAAAQQLPSSLRAALTYSLGVLALRRPFIHKILDYEDECFALLT
LVLETHSLRTTDGSFAESLYGLRRRAVNIKVKGDNKGLDAREEINHTGLEKRQKVLSVVF
LVILPYLRSKLHSIYNKEREAALQASLWGTEDERFGDTDYFDGNGNSIVSTSSSDTEESV
RDRLRKKIRKIVAVCYPWIHAGNEGLSFAYQLLYLLDATGFYSLGLHALGIHVCRATGQE
LMDTSSRISKIRSRERERLRGPPWLKAVQSALLSCAYGVLDYAQTGLIAAVFFFKMMEWW
YQSAEERMSAPTVYPPPPPPPPPKVAKDGIPLPTDRTLCPLCSQKRANPSVVAVSGLVFC
YSCVFRYVSQYKRCPVTLMPATVDHIRRLFHDV
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttcaagtaggaggacaagggactcgtcctactttctttgaaatggctgctgca
caacagttgccttctagtcttagagctgctttaacttattcccttggtgttttagcttta
agaagacctttcatccacaaaattctagattatgaggatgagtgctttgctttgcttacg
ctagttcttgaaactcatagcttacgaactacagatgggtcttttgctgagtctttatat
ggtctgcgaagaagggcagttaacataaaagttaagggtgataacaaaggtctagacgcc
agagaagaaattaatcacactgggttggagaagcgccaaaaagttctttcagttgtgttt
ctggtcatattgccatatctcagatcaaaattgcattcaatctacaataaagaaagagag
gctgctcttcaagctagtttatggggcactgaggatgagagatttggtgacactgactat
tttgatggaaatggaaactccatagtttcaacaagcagttcagatacagaagaatcagtt
agagatcgtttgagaaagaaaatccgtaagatcgtagctgtttgctacccatggatacat
gctggaaatgaaggtttatcatttgcttaccagctactgtatttgctggatgctactgga
ttttactctctaggactccatgcccttggcattcatgtctgtcgggctacaggacaggag
ctgatggatacttcttctaggatttctaaaataagaagccgtgaacgagagagacttcgt
ggccctccttggctaaaggcagtacaaagtgctttactaagttgtgcatatggagttctt
gactatgctcaaactggcctaatagcggcagtgtttttctttaaaatgatggagtggtgg
taccagtcagcagaagaaaggatgtcagctccaactgtttatccacccccaccccctcct
ccacctccaaaggttgcgaaagatggaattccactacctacagacagaacactgtgtcct
ttgtgctcacaaaagcgtgcaaatccctcagtggtggcagtttcaggattagtcttctgc
tattcctgcgttttccgatatgtctctcagtataagcgatgccctgtgacgttgatgcct
gcaactgtggatcatatcagaagactatttcatgatgtttaa
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