Solanum lycopersicum (tomato): 101252591
Help
Entry
101252591 CDS
T02665
Name
(RefSeq) DNA repair protein XRCC4 isoform X1
KO
K10886
DNA-repair protein XRCC4
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
101252591
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sly03400
]
101252591
DNA repair and recombination proteins [BR:
sly03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
101252591
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRCC4
XRCC4_CC
XLF
TED_complement
Beta-sand_ComC_2nd
Prominin
Motif
Other DBs
NCBI-GeneID:
101252591
NCBI-ProteinID:
XP_004241021
UniProt:
A0A3Q7GST2
LinkDB
All DBs
Position
6:complement(39207083..39210762)
Genome browser
AA seq
254 aa
AA seq
DB search
MGSPSPKHTCLKLVISNKEQIFVKGTWFSSYFDLFITDGLHSWTCHASEEEVEERASQWD
QPVSEYIDLGEKYLGFQQPGSVYGFDDAGTGHKRLSWTFEKEGTKLEWRWKCQSSSNSKK
TTADILDFLMDANIRLSDEVVSKTESFERMKVEAEKCLTQSEKLSKEKEEFESAIYAKFL
GVLNAKKKKLRELRDKLSKQATSVEEPVEEDAQSTDRTETFDEEISGEEVEKDDVGTSKD
VPARRGRGRGRKRK
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggggtcaccaagtccgaaacacacatgcctcaaactggtaatatctaataaggaacaa
atattcgtgaaaggcacatggttctcttcttactttgacctcttcatcactgacggcctc
cattcttggacttgccatgcgtctgaggaagaggttgaagagagagcatctcagtgggat
caacccgtttcggagtatattgatttgggtgagaagtatttaggatttcaacaacccggt
tctgtttatgggtttgatgatgctggtactgggcacaaaaggctctcatggacatttgag
aaagaaggaactaagctggaatggcggtggaaatgccaatcgtcgtctaatagcaaaaaa
actacagctgatatcttggacttcctcatggatgcaaatattagactgagtgatgaagtt
gtcagtaaaactgagtcatttgagaggatgaaggtggaggcagaaaaatgtttaacacaa
agcgagaaactcagcaaagagaaagaagaatttgaatctgcaatatatgcaaagtttctt
ggagttctgaacgcaaagaagaaaaaactcagagaacttcgcgataagctctcgaaacag
gcaacctctgttgaagagccagtagaagaggacgcacaatctacggacagaactgagacc
tttgatgaggaaataagtggggaagaagtggagaaggatgatgttggcacttcaaaagat
gttccagccagaaggggtcgtggtcgtggtcgaaagagaaagtaa
DBGET
integrated database retrieval system
