Solanum lycopersicum (tomato): 101252660
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Entry
101252660 CDS
T02665
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial isoform X1
KO
K03093
RNA polymerase sigma-I factor
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sly03021
]
101252660
Transcription machinery [BR:
sly03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
101252660
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
4HB_MCP_1
Motif
Other DBs
NCBI-GeneID:
101252660
NCBI-ProteinID:
XP_004234179
UniProt:
A0A3Q7FG74
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Position
3:complement(2781661..2786827)
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AA seq
516 aa
AA seq
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MGVVTVSSSASRSPLGLSSRFSARLCPLKRPVIVSFKKDITKNTTLVSPKESISSPIETS
KENEKRSRRVSKRTERVHAVTIEAPPSTLELDYSEAAAKLESIYKRSLETASPNTEVKDH
LVKRRPRTRKRIVESDEEAKKEVVDNVVKNRRKKSKRLNLDQRIALLKNKEGKMLASSER
RKLNEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHTWLFKLMQPMKAILQV
KENLQNDLGREPTDGEVAEATNMDASELRKKLEAGRAARNKLIKHNLRLVLFVMNKYFQD
FANASRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRYMTTSSFTKVPFG
LESIRVEIQKAKLELLFELQRIPTDDEIIKRVGFSPERYHEVMKVSKPIFSLHARNKTTQ
EELINGITDVDGVDGDKRKQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEI
AGNLNISREMVRKHEVKALMKLKHPTRVDYVRRYIF
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgactgtttcaagctctgcatctcgaagtccattgggattgagctcaagg
ttttcggctcgtttatgtccgcttaaaaggccagtaattgtatcgtttaaaaaagatata
acgaagaatacaactttagtttcacctaaggagtccatatcctcgcctattgaaacatcg
aaagaaaatgaaaaaaggtcaagacgagtatctaagcgtactgagagagtgcatgctgtt
acaatcgaagcccctccaagtacgttagaattagactacagtgaagctgctgccaaactt
gaaagtatctacaagcgcagtctggaaactgctagccccaatacagaagttaaggatcat
ttggtgaagagaaggccaaggacgaggaagaggattgtagaaagtgacgaggaagcgaag
aaagaagttgttgataatgtggtcaagaatcgtagaaagaagtcaaagagattgaatctt
gaccagaggattgctctactaaagaataaagaaggtaaaatgcttgcttcatccgaaaga
agaaaacttaatgaggacaccgaagatgaaaaaattgataagcttgtcagagaatattca
ggtgctaccgacttagcgagcttagactggaagaaaatgaagatccctccagtgcttcca
tcatctgagcatacgtggctcttcaagttgatgcaacctatgaaggcaatccttcaagtt
aaagaaaacttgcaaaatgatttggggagagaaccaactgatggtgaagtggctgaggca
acgaatatggatgcctctgaactacggaaaaagctggaagctggtcgagctgctagaaat
aagctgattaagcacaatctacgtcttgttttgtttgtgatgaacaaatattttcaagat
tttgcaaatgcgtcaagattccaagacctctgtcaggcaggagttaagggtctaatcaca
gctattgaccgatttgaacctaataggaaatttaggctatcaacatatggtcttttttgg
ataaggcatgccataatacgttatatgacaacctcaagcttcaccaaagttccgttcggg
cttgaatctatcagagtggaaatccagaaggccaagttggagttgctgtttgagctccag
aggataccaacagatgatgaaataattaaaagagttggattttcccctgagagataccat
gaagtgatgaaagtatctaaacctatcttctctctccacgccagaaacaagacaacccaa
gaagaactcatcaatggaataactgacgtagatggcgttgatggggataagaggaagcag
ccagctctactcaggcttgctcttgatgatgtgcttgattctcttaagcccaaggagagt
ctagtaatcagacaaagatatggacttgatggcaaaggtgatagaacattgggagaaatt
gcgggtaacctaaatatttcgagagagatggtacggaagcatgaagtgaaggctctcatg
aagctcaagcatccaactcgagtggattatgttcgccggtacatattctaa
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