Solanum lycopersicum (tomato): 101252831
Help
Entry
101252831 CDS
T02665
Name
(RefSeq) splicing factor Cactin
KO
K25058
cactin
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sly03041
]
101252831
Spliceosome [BR:
sly03041
]
Complex C
Other components
Complex C specific factors
101252831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CactinC_cactus
Cactin_mid
Motif
Other DBs
NCBI-GeneID:
101252831
NCBI-ProteinID:
XP_025888925
LinkDB
All DBs
Position
10:63799018..63801537
Genome browser
AA seq
680 aa
AA seq
DB search
MGSSGNRRSKGKTASKSGRRRRRSSDDIASDSDSISHTESESESDSSPPSSSRRRSSSSR
SKSRGHSSRSRNHDYADQESSDDERKKKKKKITEEEIALYMAKKAQKKAAKVAKKLKTQN
VSGYSNDSNPFGDSNLNENFVWRKKIERDVTRGVPLDTFSMKAEKQRQKERMAEIEKVKK
RREERAIEKAQREEELQMLARERARAEFQDWEKKEEEFHFDQSKVRTEIRLRQGRVKPID
VLIKQLEPSGDFDVEIDEPYVVFKGLAIKEMEELQEDIKLHIDLDRETPLHIQYWEALLV
VCDWELAEARRREAMDKARVRGEELPHELLAEERGLHSSIETDVKSLLQGKGYGELEALQ
SQIESQMRSGTAKVVEYWEAVLKRLQIYKAKACLREIHAKMLREHLEHLEKPVESRDVEV
EETLRTDEEDTDHEQNDVRAISPEPILNEVVKEKEEVEGEEEEEIDDEEAGSYSPVLMHG
DDIEEAVDPEEDRAILERKRMAVLEERRAQDKILPPTPAEDNFEKKASKTMGAMEEGDVV
FGSNDEINLDSQVYWWHDKYRPRKPKYFNRVHTGYEWNKYNQTHYDHDNPPPKIVQGYKF
NIFYPDLVDKARAPTYVIEKDGDSADTCIIKFHAGPPYEDIAFRIVNREWEYSHKKGFKC
IFDRGILHLYFNFKRHRYRR
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgggttcctccggcaaccgtcgtagtaaagggaagacggcgtcaaagtccggcagacgc
cgccgccgatcttccgacgatattgcatcagactccgattcaatttctcacaccgagtcg
gaatccgaatccgactcatctccgccgagtagcagccgccgccgttcaagcagtagcaga
agcaaaagtcgaggtcatagtagcagatcgagaaatcatgattatgcagaccaagagagt
agtgacgacgagcgaaagaagaaaaagaagaaaattactgaagaagaaattgctttgtat
atggctaaaaaagcacagaagaaggcagcgaaagtagcgaagaagctgaaaacgcagaat
gtttctggttattcgaacgattcaaatccatttggagattcgaatctgaacgaaaatttt
gtctggcggaaaaaaattgaacgagatgttactcgaggggtaccgctcgatactttctcg
atgaaggcagagaagcaaaggcagaaagaaagaatggctgaaattgaaaaggtgaagaaa
aggagagaagaaagagcaattgaaaaagctcaacgagaagaagaattacagatgctagct
agagaacgggcccgggctgagttccaggattgggagaagaaggaagaagagtttcatttc
gatcagagcaaagtccggactgaaattcgtcttcgtcaaggtcgtgttaagcctattgat
gttcttatcaagcaattagaaccttctggagatttcgatgtggaaatagacgagccctat
gtggtgttcaagggtttggctataaaagagatggaagaacttcaggaggatataaaattg
catattgatttggatagggaaacaccactgcatatacagtattgggaagcccttttggtg
gtttgtgactgggagttggctgaagctaggagaagggaagcaatggacaaagcacgagta
cgcggagaggagttaccacatgaattgctagcagaagagaggggtttgcattccagcatt
gaaacagatgtgaagtctttgttacaaggtaaaggttatggtgaattagaagcattgcag
tcacaaattgaatcacaaatgcgatctggtactgctaaagttgtagaatattgggaagct
gttcttaaacggcttcagatttacaaggctaaggcttgtttaagggaaattcacgctaaa
atgctgcgcgaacatcttgagcatcttgagaaaccagtggagagccgtgatgtagaggtg
gaagagacattgaggactgatgaggaagacacggatcatgagcaaaatgatgttcgagcc
atttctccagaaccaatcttgaatgaggtagttaaggagaaagaggaggtggagggggag
gaggaagaagaaatagacgatgaagaggctggttcttattcgcctgtcttaatgcacggg
gatgatatagaagaagcagttgatcctgaagaggacagggcgatactcgagaggaaacgt
atggctgttttggaagagagacgtgcccaagacaagattttgccaccgactcctgcagaa
gacaactttgagaagaaggcttctaaaactatgggagcaatggaggaaggggatgtagta
tttggctcaaatgatgaaattaatcttgattcacaggtgtactggtggcatgacaagtat
aggccaaggaagcctaagtatttcaaccgtgttcatactggttatgaatggaacaagtat
aatcaaactcattatgatcatgacaacccacctccaaagattgtgcagggatacaaattc
aatatcttctatcctgatcttgttgacaaagcaagagctccaacttatgtcatagagaaa
gatggagatagtgctgatacttgcatcataaaattccatgctggccctccttatgaggac
atagctttccgaattgttaacagagaatgggagtactcccataaaaagggattcaagtgc
atattcgaccgaggaattctgcatttgtactttaacttcaagcgtcacagataccgtcgt
tga
DBGET
integrated database retrieval system
