Solanum lycopersicum (tomato): 101253010
Help
Entry
101253010 CDS
T02665
Name
(RefSeq) replication factor C subunit 3 isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03030
DNA replication
sly03410
Base excision repair
sly03420
Nucleotide excision repair
sly03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
101253010
03410 Base excision repair
101253010
03420 Nucleotide excision repair
101253010
03430 Mismatch repair
101253010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sly03032
]
101253010
03036 Chromosome and associated proteins [BR:
sly03036
]
101253010
03400 DNA repair and recombination proteins [BR:
sly03400
]
101253010
DNA replication proteins [BR:
sly03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
101253010
DNA Replication Termination Factors
ELG1-RFC complex
101253010
Chromosome and associated proteins [BR:
sly03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
101253010
DNA repair and recombination proteins [BR:
sly03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
101253010
Check point factors
HRAD17(Rad24)-RFC complex
101253010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA
Rad17
Mg_chelatase
RuvB_N
Sigma54_activ_2
AAA_5
AAA_16
AAA_11
AAA_22
AAA_24
DUF815
AAA_23
ABC_tran
AAA_2
nSTAND3
AAA_29
Motif
Other DBs
NCBI-GeneID:
101253010
NCBI-ProteinID:
XP_004228337
UniProt:
A0A3Q7EC99
LinkDB
All DBs
Position
1:complement(34180238..34194082)
Genome browser
AA seq
354 aa
AA seq
DB search
MLWVDKYRPKTLDKVIVHQDVAQNLRKLVSEGDCPHLLFYGPPGSGKKTLIMALLRQIFG
PSADKVKVENKIWKVDAGTRTIDVELTTLSSTHHVELNPSDAGFQDRYVVQEIIKEMAKN
RPIDTKGKKGFKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCSNSSSKVTEAVRSR
CLNVRINAPMEEEIVSVLEFIAKKEGLQFPQGFAARIVEKSNRNLRRAVLTFESCRVQQY
PFTNNQTVPPMDWEQYVSEIASDIMKEQSPKRLFEVRGKLYELLTNCIPPEIILKRLLFE
LLKKLDSELKHEVTNWAAHYEHRMRLGQKAIFHLEAFVAKFMSIYKSFLISTFG
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgggttgacaagtaccgccctaaaacattagataaagttattgtacaccaggat
gttgctcaaaatcttcgtaaactggtctcagagggagattgtcctcatctcctcttttac
ggccctcccggttcaggaaagaaaactctcattatggcacttcttagacagatttttggt
ccaagtgctgacaaggttaaggttgagaacaagatttggaaagttgatgctggtactcgg
acaattgatgtggagctcacaacattgtcaagcactcaccatgtggaattaaatccaagt
gatgccggatttcaggacagatacgttgttcaagagataatcaaagaaatggccaagaac
agaccaattgacacgaaagggaaaaaggggtttaaagttctagtgctaaatgaagttgac
aagctctcaagagaagcacaacattctcttcgaagaacaatggagaagtacagtgcatca
tgtcgcctgattctttgctccaacagttcttcaaaggtcactgaagcagttcgctcacga
tgccttaatgtgcgaataaatgcaccaatggaagaagagattgttagtgttttggaattt
attgccaaaaaggaaggacttcaatttccacagggttttgcagcccgcattgtggaaaag
tcaaataggaatctgagaagggcagttttaacatttgagtcttgccgtgttcaacagtat
ccctttacaaacaaccaaactgtacctccaatggactgggagcaatatgtttcagaaatt
gcatcagacataatgaaagagcagagccctaaaaggttatttgaggtaagaggaaagtta
tatgagcttctaactaattgtattccccctgaaattattttgaagaggctactttttgaa
ctattaaagaaactggattcagagttgaagcatgaggtgaccaactgggctgctcattat
gagcataggatgcgtcttggacagaaggctatatttcatctcgaagcatttgtggccaaa
ttcatgagcatctacaagagtttccttatttcaacatttggctaa
DBGET
integrated database retrieval system
