Solanum lycopersicum (tomato): 101253117
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Entry
101253117 CDS
T02665
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101253117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sly03019
]
101253117
03110 Chaperones and folding catalysts [BR:
sly03110
]
101253117
03029 Mitochondrial biogenesis [BR:
sly03029
]
101253117
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sly04147
]
101253117
Enzymes [BR:
sly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
101253117
Messenger RNA biogenesis [BR:
sly03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
101253117
Chaperones and folding catalysts [BR:
sly03110
]
Heat shock proteins
HSP60 / Chaperonin
101253117
Mitochondrial biogenesis [BR:
sly03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
101253117
Exosome [BR:
sly04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
101253117
Exosomal proteins of other body fluids (saliva and urine)
101253117
Exosomal proteins of breast cancer cells
101253117
Exosomal proteins of colorectal cancer cells
101253117
Exosomal proteins of bladder cancer cells
101253117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
101253117
NCBI-ProteinID:
XP_004228946
UniProt:
A0A3Q7ECG0
LinkDB
All DBs
Position
1:41646570..41651720
Genome browser
AA seq
599 aa
AA seq
DB search
MASTFAGMSSAGPLAAPSTSSNKLSSVANISSTSFGSKRNVALKKSRRPTILAAAKELHF
NKDGSAIKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAREVELEDPV
ENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTAKA
LVAELKNMSKEVEDSELADVAAVSAGNNLEVGSMIAEAMSKVGRKGVVTLEEGKSAENSL
RVVEGMQFDRGYVSPYFVTDSEKMSVEYENCKLLLVDKKITNARDLVNVLEDAIRNGYPI
LIIAEDIEQEALATLVVNKLRGALKVAALKAPGFGERKSQYLDDIATLTGGTVIREELGL
TLDKADKEVLGHAAKVVLTKDATTIVGDGSTQEAVNKRVAQIKNLIEAADQDYEKEKLNE
RIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLAAKVD
AIKGTLANDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSSDDPKFGYNAATGN
YEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEAAVAGNPMDNSGYGY
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggcatctacttttgctggtatgtcctcagcaggtcccttggctgctcccagcacttcc
tcaaacaagctttcctctgttgctaatatatcttccacctctttcgggagcaaaagaaat
gttgcactaaaaaagtcacgcaggccaacaattttggctgcagctaaagagttgcacttc
aacaaggatggctccgctatcaagaagctacagaatggtgtgaacaaacttgctgatcta
gttggagttactcttggcccaaaaggcaggaatgttgtccttgagagcaagtatggtgct
ccaaaaattgttaatgatggagttactgtggccagagaggttgaattagaggatccagta
gaaaacattggtgcgaaattagtgagacaagctgctgccaaaaccaatgacttggctggg
gatgggactactacatctgtcgtgctagctcagggcctaattgctgaaggtgttaaggtg
gttgcagctggtgcaaaccctgtcctaatcaccagaggaattgagaagacagcaaaagca
ttagtagctgagttgaagaatatgtcaaaagaggtggaagacagtgaactagcagatgtg
gctgcagtaagtgctggcaacaatttggaagtagggagtatgattgctgaagccatgagc
aaggttggaaggaaaggtgttgtgacactagaggagggtaaaagtgctgaaaacagtctg
cgtgtggttgaaggaatgcaatttgaccgtggttatgtctctccttactttgttaccgac
agtgagaaaatgtccgttgaatatgagaactgtaagttgctactggttgataaaaagata
acaaatgcaagagatcttgttaatgtcctggaagatgctatcagaaatggttacccaatt
ttaattattgctgaagatattgagcaggaagctttggcaactcttgttgtcaataagctt
agaggtgccttgaaggtcgctgcacttaaagctcctggttttggtgagcgaaaaagccag
tatcttgatgacatagcaacccttactggaggcactgttattagggaggagcttggcctt
accttggacaaggctgacaaggaagttctaggtcatgctgctaaagtagtgctgactaag
gatgccactacaattgttggtgatggtagcactcaggaagcagtcaacaaacgtgttgca
cagattaaaaacctgatagaggctgcagatcaagattatgaaaaggaaaagctaaatgaa
agaattgctaagttatcaggaggtgtggctgtcatacaggttggagctcaaactgaaact
gaattgaaggagaagaaacttagagtagaagatgctctcaatgcaacaaaggcagctgtt
gaggaaggtattgttgttggaggagggtgcacgctcctcagacttgctgcaaaagttgat
gccataaagggaacccttgcaaatgatgaggagaaggttggagcggatattgtcaaaaga
gcattgagctaccctttgaaattgattgctaaaaatgctggtgttaatggaagtgttgtc
agtgagaaggtgctgtcaagtgatgatccaaaatttggatataatgctgcaactggcaac
tatgaagacttaatggctgctggcatcattgatccaacaaaggtggtgaggtgttgtcta
gaacacgctgcatctgtagcgaagacattcttaatgtcagattgtgtggtggttgagatc
aaggagcccgaagcagcagttgctggcaacccgatggacaactcaggatacggttactag
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