Solanum lycopersicum (tomato): 101253170
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Entry
101253170 CDS
T02665
Name
(RefSeq) uncharacterized protein
KO
K04485
DNA repair protein RadA/Sms
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sly03400
]
101253170
DNA repair and recombination proteins [BR:
sly03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
101253170
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
ChlI
DnaB_C
Zn_ribbon_LapB
AAA
AAA_22
NACHT
AAA_16
NTPase_1
AAA_24
Lon_C
nSTAND3
AAA_19
nSTAND_NTPase5
AAA_29
AAA_5
DAP3
Motif
Other DBs
NCBI-GeneID:
101253170
NCBI-ProteinID:
XP_004235636
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All DBs
Position
3:complement(66173791..66183323)
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AA seq
593 aa
AA seq
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MQVPNMQALRALRFQKHLLNLPPTNPLSSLRFTIINTSRQFHFTRRKHFPEESTALTNDA
VQGWAAPSAARENPSGENVPQRESKSSANYSNVLGSKSRVYEVTGNGNKKKGKGKSKTVW
VCSDCGYDDGQWWGICKQCNGVNTMKRFSEGVEHLTSGFEVLENVTRSWLPHQSVRALPT
KLTDVNKGINQSNWRIPLSGLFGAEVGRVLGGGLVPGCLVLIGGDPGVGKSTLLLQIAAI
VAEGCDMGGPAPVLYVSGEESIEQIGNRADRMRIGTDELFLYASTDVEDILEKTQTLPLR
ALVIDSIQTVYLRGVTGSAGGLSQVKECTEVLLRFAKKTNIPVFLIGHVTKSGEIAGPRV
LEHIVDVVLYMEGEKCSSHRLLRSVKNRFGSTDELGVFEMSQSGLQAVSNPSEMFLSEQQ
SDSEFLAGLAVTVIMDGSRAFLIEIQALCVAGSSVSRQVNGVQAGRAEMIISVLIKQAGL
KLQENGVFLNVVSGVSLSETAGDLAVAAAICSSFLEFPLPVGIAFIGEIGLGGEIRMVPR
MDKRINTVVKLGYKKCIIPKSAETLLSALDLGDTEIVACRNLKEMINIVFRKR
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtaccaaacatgcaagcactaagagctctccgtttccaaaaacacttgctcaat
ctccccccaacgaaccccctttcatctctccgtttcactatcataaacacttctcgccag
tttcactttactcgccggaaacacttccctgaagagtccacagctctcaccaacgacgcc
gtacagggctgggccgctccttcagctgctagagaaaaccctagtggtgagaatgttccg
caaagggagtctaaatcgagtgcaaattactccaatgttttgggttcaaagagtagggtt
tatgaggttacagggaatgggaacaagaagaaggggaaaggcaagagtaaaacagtgtgg
gtgtgttctgattgtgggtatgatgatggacagtggtgggggatatgtaagcagtgtaat
ggggtgaatactatgaagcggttttctgaaggtgtagagcatctcacgagtgggtttgag
gttttagagaatgtgacaaggtcgtggctgcctcatcagtctgttagagctttgcccacg
aaattgacggatgtgaataaggggattaatcaatcgaattggcgaatacctctgtctggc
ctttttggagctgaagtaggaagagtacttggtggtggtcttgtgccaggttgcttagtt
ttaattggcggtgatccgggtgttggtaagagcacattacttttacagattgcagccata
gttgcagaggggtgtgatatggggggaccagcaccagttctctatgtgtctggggaagag
agtattgagcaaattgggaacagagcagatcggatgagaatcgggacagatgaactattt
ttatatgcgagtacagatgttgaggatattttggaaaagacccaaactctcccactgcga
gctttggtaattgattccatccagacagtatatctgagaggagtaactggaagtgcaggt
ggtctatcgcaggtaaaagaatgcacagaagtgttgctgcggtttgccaagaagaccaat
atccctgtgtttctgattggacatgtgactaaatctggagaaatagctggtcctcgagtc
ttggaacacatagttgatgttgttctctatatggaaggagagaagtgttcatctcatcgt
ttacttcgttcagtgaagaatcgatttggatccacagatgagcttggagtgtttgaaatg
tcacaatcaggcttgcaggctgtttcaaacccaagtgaaatgtttctaagtgaacagcag
tcggattctgagtttctggctggattagctgttactgtaattatggatggatctcgagcc
tttcttattgaaattcaggcattgtgtgttgctggttcatctgtctcaagacaagtaaat
ggtgttcaagctggcagagctgagatgataatttcagttcttataaagcaagctggtctc
aagctgcaagagaatggcgtttttctcaatgttgtcagtggtgttagcctgtctgagact
gctggtgatcttgcagtagcagcagcaatttgcagcagttttttggaattccctcttcct
gtgggcattgcattcattggggaaattggccttggtggtgaaattcgtatggtaccaaga
atggacaaaaggataaatacagtggtgaagctgggatacaagaaatgtataattcccaaa
tcagctgaaacattactgtcagctttagatcttggagatactgagattgtggcctgcagg
aatttgaaggagatgataaacattgtgttcagaaaacgctga
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