Solanum lycopersicum (tomato): 101253216
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Entry
101253216 CDS
T02665
Name
(RefSeq) novel plant SNARE 11
KO
K08494
novel plant SNARE
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sly04131
]
101253216
Membrane trafficking [BR:
sly04131
]
SNARE
SNAP-25[N] (Qb)
NPSN
101253216
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec20
V-SNARE_C
PigL_N
DUF7605
MCPsignal
V-SNARE
BLOC1_2
Occludin_ELL
Prominin
DUF1664
DUF6988
ANIS5_cation-bd
Syntaxin_2
Vps53_N
MutS_III
VBS_C3G9
Zw10_N
Wtap
Motif
Other DBs
NCBI-GeneID:
101253216
NCBI-ProteinID:
XP_004245842
UniProt:
A0A3Q7HSC5
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All DBs
Position
8:63675810..63682933
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AA seq
261 aa
AA seq
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MASLSGLSEELGEIEGQISDIFRALSNGFQKLEKIKDSNRQSRQLEELTGKMRECKRLIK
EFDREVKDLEYKSDADTTKMLSEKKQSMIKELNSYVALKKQYASNIENKRVDLFEGPGEG
FAEENGLLASNMSNQQLMDQGNRMMDETDEAIERSKKVVHETVNVGTETAAALKAQTEQM
SRIVNELDSIHFSIKKATQLVKELGRQVATDRCIMALLFLIVIGVIAIIIVKIVNPHNKD
IRDIPGLAPPAPSRRLLAYPY
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgttgtctggccttagcgaggagcttggggaaatcgaaggacagatttcggat
atttttcgagctctttcaaatgggtttcagaaattggagaagattaaggattcgaatagg
cagagcaggcagttggaggagctaacaggaaagatgcgagaatgtaagaggcttatcaag
gaatttgacagagaagtaaaggatttggaatataaaagtgacgcagataccaccaagatg
ctgagtgagaaaaaacaatcaatgatcaaagagttgaactcttatgttgctctgaaaaaa
caatacgcaagcaatattgagaacaagcgagtagatctttttgagggtcccggtgaaggg
tttgctgaagagaatggcttgctagcttcaaatatgagcaatcaacagctgatggatcaa
ggaaataggatgatggatgagacagatgaagccattgagaggtcaaaaaaggtggttcat
gaaactgtaaatgttggaaccgagactgctgcagcactgaaggctcagactgaacaaatg
agtcggatagtcaatgagctagactcaatccatttttcaataaagaaggctacacaattg
gtcaaggaactcggtaggcaggttgccactgatcgttgtattatggccttgctctttctg
attgtgattggggtcatagcaatcattattgtgaagattgtaaacccacataacaaagac
atccgggacatccctggattagcccctccagcacccagtcgacggttacttgcttatcct
tactga
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