Solanum lycopersicum (tomato): 101253285
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Entry
101253285 CDS
T02665
Name
(RefSeq) protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1-like
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sly03019
]
101253285
Messenger RNA biogenesis [BR:
sly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
101253285
Surveillance factors
Other surveillance factors
101253285
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
101253285
NCBI-ProteinID:
XP_010321021
LinkDB
All DBs
Position
5:13502880..13511577
Genome browser
AA seq
1547 aa
AA seq
DB search
MAEGNLDLPDDLLSSKTSDHSKGNDDNKPFMGQLDISKDQPMVDSSIPLSPQWLYVKPSD
TKMEPRPPSSLSLGSSVDSSQKDAWRTDVPEDKKDWRRTTMETESSRRWREEERETGLLG
RRERRKTDRRAEHDVNNRNSGVDTRRDNKWSSRWGPDDKEKENRTEKRIDVDKEDVHNDG
QTFVANHTVSERESDSRDKWRPRYKMEGNSAAPSSYRAAPGFGQERGKVEGSNVGFNLGR
GRSTGTIIRTSSGGAIGASPFENSVPGKSGISTGIISYPRGKALDIYRRQKLGSSLCSMP
ENMEEAPPVTQVIAIEPLAFVVPDAEEEAVFNDIWKGKITGGGVSNNSFRKGQSMDNVTE
TGDTEPNNTKIGAPSADVTEETVDGLLKTSIRVEEANTYSFVYENGVRVKFDGGDNHEGQ
KDNHSEAIAADGSLLTRERADNSDCFKYISGSQFDISMQSLPDSGATKTPIFENSQHVAF
DGSLKVSDDSNSAFVKSSSEIYWNNLLGRGIPPEELSLYYRDPQGEIQGPFLGADIISWF
DQGFFGMDLLVRLEDAPEDSPFFELCDVMPHLKFEHEHVGNTNLSQAEPSAVLEGKLDPD
LRSSASVPEMVGYSAFDGSSWPPSDFDGIGGHRVQSIPDHPARQFKPAYLHSEDFNNFVA
QDEEIVFPGRPGSGGNAIGKTSTGLTDPSKIHRATPSAICEGGVPDHEGTLHPLGLLWSE
LEGTAGKNGPIFDVPFRGSGQDQVLNSGAARVGPFGAKTDSTSALETWTDAYRRNAGSEL
NIYHDAMDASRLLHQDHELNRFELADKMFPQQLQQQRPHNLISSHNSHLNEAMMERGKNH
NSIHQPQLASQTGQDLEHFMALQLQQQRQLLQLQQLQQQQQFHQQQMLMKEQESHARQLV
LEQLLQRQVHDPSHTQSRLDAIRHSSALEQVLIEQQILSELQQRPHLPPRHAEPSIEHLI
QAKFGQIPHQGPQNDLMELLSRAKHGQLHPLEHQALQQEQAHERLRQRLEMEEDRQIGAV
WPADETGQYLRNSGVARRANSGFGSLDIYQQQQMPPAEEHVSHLQRNLSMQDRIQRGLYD
TGFLPLERTMSVPGGGPGVNLDAINPLVRAQGLEMQDPNSRMHSAGHMPGFSSGIHLQSP
HRPLFSSQFHAPNVDTIENHWSERNGQLPADWMETRLQQLHLNGERHRRDFDVKRASEDQ
SMWMSAGANDDSSKRLLMELLQQKSGQQSTEQAEITRGILFERGFQSGHFSTTNASNRSF
NPLLDQDTSLNQAFSVGSYGSNSGFPPQRDHVNEIAGSLDACERLPFQSHSGAFAEPEPV
FSSINDASQVHLEARESIVRQAGVATVEGEMPINLLSRHTSLGTGGGSLDSYNDKNDRRD
SAAEEIPKERVVVTSKRSDNILPKYPPVLRVSSTQEGLSEIASDGLVRGKNSSDAMASEG
GRREVGGNAANQVPSAMTSEKKDGRFRRTASCSDADVSETSFSDMLKSNVKKATAQEAHA
SEALDATQYARSGKKKGKKGRQIDPALLGFKVTSNRIMMGEIQRIED
NT seq
4644 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaggaaatcttgatcttcctgacgatctcctttcctctaagacttctgatcac
tccaaaggtaatgatgacaacaagcctttcatgggccagcttgatatttccaaagatcaa
ccaatggtggacagcagcattcctttgtctccgcagtggctttatgttaaaccaagcgac
acaaagatggaaccacgtccaccaagctctctgtcacttggaagttctgttgattcaagt
cagaaggacgcttggcgtacagatgtacctgaggacaagaaggattggagaagaacgaca
atggaaactgagagcagtcgccggtggcgtgaggaagagagggaaactggcttgcttggt
cggagagaacgaaggaaaaccgatcgccgtgctgagcatgacgttaataaccgtaattct
ggggttgatacaaggcgtgataacaagtggtcttctaggtggggtcctgatgacaaggaa
aaagaaaatcgcactgagaaaaggatagatgtagataaggaagatgttcataatgatggc
caaacatttgtggccaaccatactgtctcagaacgggagtcagattctcgtgacaagtgg
cgtccacgctataaaatggagggcaactctgcagctccaagttcctatcgagctgctcca
ggttttggacaggagagaggaaaagtagaagggtcaaatgtgggatttaacttgggtcgt
gggaggtctactgggactattataagaacttcctctgggggtgcaattggtgcttcacca
tttgagaattctgttcctggaaaatcaggaatctcgactggcataatcagttatccaagg
gggaaagctcttgacatataccgcaggcaaaagcttggctcatctctttgtagcatgcct
gaaaatatggaagaagctcccccagttactcaagtaattgctattgaaccattagctttt
gttgttcctgatgctgaggaggaggctgttttcaatgatatatggaagggtaaaattact
ggtggtggtgtttctaacaattcctttagaaagggtcaatcaatggataatgtcacagaa
acaggggatacagagcccaacaatacgaaaataggtgctccctccgctgatgtcactgaa
gagacagttgatgggttgctgaaaacatcaatacgtgttgaagaagccaatacctatagc
tttgtttacgagaacggtgtcagggtcaagtttgatggaggagataatcatgaaggacag
aaagacaatcattctgaagctatcgccgcagatggaagtttgttgaccagggagagagct
gataatagtgactgcttcaaatacattagtgggtcccaatttgatatttctatgcagagc
ttaccagattctggagcaaccaagacacctatctttgagaacagtcaacatgttgctttt
gatggcagtttaaaggtgtctgatgattcaaattccgcatttgtgaagtcctcttctgaa
atctattggaacaaccttctaggaaggggtattccaccagaggagttgagtttgtactat
cgtgatcctcagggcgaaatccaggggccatttcttggagctgacattatttcatggttt
gatcagggattttttggtatggacttgctagttcgcttggaagatgcccctgaagattca
cctttctttgaactttgtgatgtaatgccgcatttgaaatttgaacatgagcatgttggt
aacaccaatctttcccaggcagaaccatctgctgtactagaggggaagttggatcctgat
ttacgtagctcagcttctgttcctgagatggttggatattctgcctttgatggttcgagc
tggccgccatctgattttgatggcattggtggacatcgtgttcagtcaatacctgatcat
ccagctcgtcaatttaaacctgcatatttacatagtgaagactttaacaattttgttgct
caagatgaagaaattgtgtttccgggaagacctggaagtggtggcaatgctattggaaaa
acttccacaggccttactgatccttcaaagatccaccgtgcaactccaagcgcaatatgt
gagggtggagttccagatcacgaagggacattgcacccacttggtttattatggtcagag
cttgaagggactgcaggaaagaatggtcctatctttgacgttccttttagaggaagtggg
caggatcaagttctaaactctggtgctgcaagggttgggccatttggtgccaagacggat
tcaacctccgctctggagacgtggactgatgcttatagaagaaatgctggatctgaactc
aacatatatcatgatgctatggatgccagccgcttgttgcaccaggaccatgaattgaac
cggtttgagttggcagacaagatgtttccccaacaacttcagcaacagcgtcctcataat
ttgatatcctctcataatagtcacttaaatgaagctatgatggaacgtggcaaaaatcat
aattcaatacaccaaccacagttagcgagtcagactgggcaggatctggaacacttcatg
gcgcttcagctgcaacagcagagacagttgctgcagcttcaacaactgcagcaacagcaa
cagttccatcaacagcaaatgctaatgaaagaacaagagtctcatgctaggcagctggtt
cttgaacaattattgcagagacaagtacatgatccaagtcacacacaatcacgtcttgat
gctattaggcatagcagtgctctggagcaggtgttgatagagcaacaaattctgagtgaa
ctgcaacagcgtccacatcttccaccaagacatgctgaaccatctattgagcatctcatt
caagcaaagtttggtcaaataccacatcaagggcctcaaaatgatttaatggagctccta
tcacgggcaaaacatggacaattgcaccctttggagcatcaagcccttcaacaagaacaa
gcacatgagaggttaagacagcgattggaaatggaggaagacagacagattggtgctgtc
tggcctgctgatgaaactggtcagtatctaagaaattcaggtgttgctcgtcgagcaaac
tctggatttggttcattagatatttatcaacagcaacagatgccccctgcagaagagcat
gttagtcatctgcaaaggaatttgtcaatgcaggatagaattcagcggggtctctatgac
actggatttctgcctttggaacggacgatgtcagtacctggtggtggtcctggtgttaat
ttggatgccataaatcctctagtgcgcgcacaaggtttagaaatgcaagatccaaattca
agaatgcactcagctggtcatatgcctggtttctcgtctggcatccacttgcaatctcct
caccgtcctctattttcaagtcaatttcatgctccaaatgtagatacaattgaaaatcat
tggtccgaaagaaatggtcagttaccagctgattggatggaaactaggctgcagcaacta
catctcaatggtgagaggcatagaagggattttgatgtcaagagggcttctgaagatcaa
agtatgtggatgtcagctggtgctaatgatgacagttcaaagcgattacttatggaactg
ctccagcaaaaatctggtcagcagtcaactgagcaagcagaaattaccagagggattttg
tttgagaggggctttcagtctggtcacttttctacgacaaatgcttcaaaccgttcattc
aaccctcttttggaccaggatacaagtctaaaccaagctttctctgttgggtcatatggt
tctaattcaggttttccaccacagagagatcatgtaaatgagattgccggtagtcttgat
gcttgtgagagattgcccttccaatctcattctggagcttttgctgaacctgaacctgtc
ttttccagcatcaatgacgcctctcaggtacatttggaggctcgcgaaagtatcgttagg
caagctggtgtggcgactgtagaaggggaaatgccaattaacttgctcagcaggcacact
tcacttgggactggaggtggaagtctcgactcctacaatgacaagaatgatagaagggat
tcagctgcggaggaaattcctaaggaacgggtggttgtgacatcaaaaaggtcggataac
atcttgccgaagtacccacctgtattgcgcgtttcttctacccaggagggtctatcggag
atagcttctgatggccttgtgagaggcaaaaattcttcagatgccatggcttctgaaggg
ggtaggagggaagtgggaggtaatgcagcaaatcaagttcccagtgctatgacgtctgaa
aagaaagatgggcgttttcgacgaactgcatcttgtagtgatgctgatgtctcagagaca
tcattcagtgatatgcttaagagtaatgttaagaaggcaacagctcaggaggcacatgca
tcagaggcattggatgcaacacagtatgcccgtagtggtaagaagaaaggaaagaaagga
agacaaattgatcctgctcttcttggtttcaaggttacaagcaatcgcatcatgatgggt
gagatacaacggatagaagattag
DBGET
integrated database retrieval system
