Solanum lycopersicum (tomato): 101253391
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Entry
101253391 CDS
T02665
Name
(RefSeq) polygalacturonase At1g48100-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly00040
Pentose and glucuronate interconversions
sly01100
Metabolic pathways
Module
sly_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101253391
Enzymes [BR:
sly01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
101253391
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
101253391
NCBI-ProteinID:
XP_069142821
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Position
7:complement(7916931..7921712)
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AA seq
449 aa
AA seq
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MSRFSTDLMNLVILLVLVIYYSLENATCNARSQESSIENFYVFNVLDYGAKGDGITYDTK
AFEATWIEACKVEGSVMMVPSDYDFLVGPITFSGSHCEKNIVFQLDGRIIAPTNPKVWGV
LQWLEFSKLNGIYVKGKGIIDGQGSVWWKNTPLLIEEYEGDYYSEEQDDYAPKIALITSK
SKGKMPRTRPAALKFHGSFNVVVTGITIQNSPKAHLKFDHCVAVQVYGITVSSPGDSPNT
DGIHLHNSQNVVINSSDIACGDDCISIQTGSSAVFIHDVNCGPGHGFSIGGLGKDNTKAC
VSNITVQDSTLQNTMTGVRIKTWQGGSGSVHGITFSNIHVSDVKIPIMIDQFYCDKRKCG
NHTSAVAISGVSYQSIEGTYSYKPVHFACSDSVPCTGVSLADIKLKPSLEKKHFYGPYCW
ETYGELRTNTTPPIDCIQPDKRIPSYDSC
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaggtttagtacagatctcatgaatttagttattttgttggttttagtaatctat
tatagtttggagaatgcaacatgtaatgctaggtcacaagagtcaagtattgagaatttt
tatgtctttaatgtcttagattatggtgctaaaggtgatggaatcacatatgacaccaaa
gcatttgaagcaacatggattgaagcttgcaaagttgaaggttcagttatgatggttcca
tcagattatgatttcctagttggtcctatcactttttcagggtcacattgtgagaaaaac
attgttttccagttggatgggagaattatagcaccaacaaaccctaaagtgtggggtgta
ttacaatggcttgaattctcaaagctaaatggaatatatgttaagggaaaaggcattatt
gatggccaaggatcagtctggtggaaaaatactcctttattaattgaagaatatgaaggt
gattattattcagaggagcaagatgattatgctccaaaaattgctttgataactagcaaa
tcaaaaggaaaaatgcccagaacaagaccagcagcactgaagttccatggaagtttcaat
gtagttgtaacaggcataacaatccaaaacagtcccaaagcacatctcaagtttgatcat
tgtgtggctgttcaagtttatgggataacagtttcatcccctggagatagcccaaatact
gatggaattcaccttcacaactcacaaaatgttgtcattaacagcagtgatattgcttgt
ggagatgactgtatatctatacaaacaggaagttcagctgtgttcattcatgatgtgaat
tgtggacctggacatggattcagcataggagggctaggaaaagacaacacaaaagcctgt
gtttctaatataacagttcaggattcaacactacaaaacactatgactggtgtaagaatc
aaaacatggcagggaggctcaggctcagttcatggaatcacgttctcaaatatccatgtc
tcagatgtgaaaataccaataatgatagatcaattctattgtgacaaaagaaaatgtggt
aaccacacatcagcagtagcaatatcaggagtttcatatcaatccatagaaggaacttat
tcatataaaccagttcattttgcgtgtagtgactctgtgccatgcacaggtgtttccctt
gcagatataaagcttaaaccttcattagaaaagaagcatttttatggaccgtattgttgg
gaaacttatggagaattgagaacaaacacaacccctcctattgattgtattcaacctgat
aaaagaatccctagttatgattcttgttga
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