Solanum lycopersicum (tomato): 101253565
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Entry
101253565 CDS
T02665
Name
(RefSeq) nuclear pore complex protein NUP54
KO
K14308
nuclear pore complex protein Nup54
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101253565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sly03019
]
101253565
Messenger RNA biogenesis [BR:
sly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101253565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Motif
Other DBs
NCBI-GeneID:
101253565
NCBI-ProteinID:
XP_004252221
UniProt:
A0A3Q7J866
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Position
12:complement(44732001..44746079)
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AA seq
388 aa
AA seq
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MFGAQPSSAFGTPSFGTPSSTPAFGTPASTPAFGTPSSTPAFGTPSSTPAFGTPSTSSFG
TGFGSTLFSTPFSQQSQPHQQQQTSLFQTPQSSSPFSFSTPLNTATLAQSSPFGTSFPFA
NAQLTTQMAPVAPLPFSLADRDIQAIVDAYKEEPGNRKYAFKHLLSSVTEPQYRTKPAGV
SDIMWAEAMGKLEGMESTDRERLWPQLVHGFKDLSQRLKLQDEVIVSDAERLQMTQNNVK
MLQRHFQADTLPWIERMRHKEQGLQRRLLRVMRILEALEGKGCRLPLMKGEAELAEKLAA
ITRQLKGSGAELSRRVQNLLTICRVQNGLGSGSVYLPGSTKIHEQSLADMQEVLQQQTEA
IARLGNVLKRDIRDVEIIMAEETEMMEG
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgttcggagctcagccctcctccgccttcggcactccatcattcggcacaccttcgtca
accccagcattcggcacacctgcgtcaaccccagcattcggcacaccttcgtcgacccca
gcattcggcacaccttcatcaaccccagcattcggcacgccgtcaacttcatcatttggc
actggttttggatcgacactattttcaacaccattttcacagcaatcacagccacatcaa
cagcaacaaacttccttatttcaaacacctcagagttcgtcccctttcagcttttccaca
cccttgaatactgcaacactggcccaatccagtccatttggtacttcctttccatttgca
aatgcccagttgactactcagatggctcccgtggctccactccccttttctctcgctgat
agggatatccaagcaattgttgatgcgtacaaggaggagcctggtaaccgtaaatatgct
ttcaagcatcttttgtccagtgtgacggaacctcaatataggacgaaacctgcaggggta
tctgatataatgtgggcagaggcaatgggcaaacttgaaggcatggagagtactgaccgt
gagcgcctgtggcctcaacttgtacacggcttcaaggatctttcccaacggctcaagctt
caagatgaagtcatagtttcagatgctgagaggctgcaaatgacgcagaacaatgtgaaa
atgttgcaaaggcattttcaagctgatacccttccttggattgaaagaatgagacacaaa
gagcaaggtcttcaaagacgccttttgagggtgatgagaatactagaggcacttgaaggt
aaaggttgtcgattgcctttgatgaaaggagaagctgaattggcagagaagttggcagcc
atcacgagacagttaaaaggttctggagcagaactttctaggagggttcagaatctgctc
accatatgtcgtgttcaaaatggcctaggaagtggttctgtttatctccctggctcaact
aagatccatgagcagagtcttgctgacatgcaggaggttttgcaacagcaaaccgaggct
attgctaggcttggtaatgtattgaagagagatattcgagatgtggagatcataatggcc
gaggaaacagaaatgatggaaggctga
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