Solanum lycopersicum (tomato): 101253667 Help Entry 101253667         CDS       T02665                                  Name (RefSeq) protein PAT1 homolog   KO K12617   DNA topoisomerase 2-associated protein PAT1 Organism sly  Solanum lycopersicum (tomato) Pathway sly03018   RNA degradation Brite KEGG Orthology (KO) [BR:sly00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     101253667  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:sly03019]     101253667 Messenger RNA biogenesis [BR:sly03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      101253667   mRNA degradation factors    5'-3' decay     Decapping complex      101253667 SSDB OrthologParalogGFIT Motif Pfam:  PAT1 Motif Other DBs NCBI-GeneID:  101253667 NCBI-ProteinID:  XP_004251956 UniProt:  A0A3Q7J6B0 LinkDB All DBs Position 12:complement(6998528..7010611) Genome browser AA seq 817 aa AA seqDB search MDGFEGGGGSSRSFMEFGDDRPAEEKFDASQYAFFGNDVVEEVELGGLEDEEDDSFPPVG FDDEEYQLGREEGGAFGSLSEIDDLNNTFSKFNKDDGGAIRPGFIGDREYRESSSAVEWS QDAEFRSWIDRKALDGGEINDSKRWPSVPYSSAAHLLESNTLYRTSSYPEQQQQHEYQQQ TLNQHYSSEPGLIPELPFPSFPPSARHPQASTNNQLRNPNGPNHPGGQQMPVSSPNFSPF LNTANQLAASHLGPQYGGKFAQGTPAGLPLHNQIPSQWLKQSTLYPGEQSSMTSNMMPQQ SHRQNGFATPHGGLQLPQQPGQQHPLRPPYGRLPGLQSQLINHHMSPPSQMMNNFDMLGL ADLRDQKAKLMLRGRQGMHYPQLGFDISSQRNVSAWTRFRSKYMSTDELENILRAQLAAT HSNDPYVDDYYHQACLAKKSAGAKLKHHFCPNNLRDGSARSRANTDPHPFLQVDALGRVA FSSIRRPRPLLEVDPPKSCATGCIEQKMSEKPLEQEPMLAARVTIEDGLSLLLDVDDIDR FLQFNQLPDGGDQLKRRRQVLLEDLASSLQLVDPLGKSVHTVNLAAKDDVVFLRIVSLPK GRKLLVRYLQLLFPGSELTRVVCMAIFRHLRFLFGGIPSDHGATETTVNLGRTVSLCICE MELKALAACLASVVCSAEPPPLRPVGSPAGDGASVVLKSILERATELLRDPHAAGKCSMP NRAFWQASFDAFFGLLTKYCFSKYDTVMQCFLTQGPPDVAVSGSDAAKAISREMPVELLR ASLPHTSEQQRKVLLEFAHRSMPVLGVGSQSGASGGT NT seq 2454 nt NT seq  +upstreamnt  +downstreamnt atggacggatttgaaggcggtggtgggagtagtaggagttttatggaattcggtgacgac cgacctgcagaagaaaaatttgatgcttcgcagtatgcattctttggtaatgatgttgtt gaagaagttgaactgggtggattggaagatgaagaggatgatagttttcctccggttggg tttgatgatgaagagtatcaattaggccgagaagagggtggagcttttggatctttatct gagattgatgaccttaacaacacattttccaagtttaacaaggatgatggtggtgccata aggccaggatttattggtgatcgggaatacagagagagctcatcagctgttgagtggtca caagatgcagaatttcgtagttggattgaccggaaagctcttgatgggggtgaaatcaat gacagcaaaagatggccatcagtgccatattcttctgctgctcaccttttggaatcaaat actttgtacaggacttcctcataccctgagcaacaacagcaacatgaatatcagcagcaa accctgaaccaacactactccagtgaaccaggactcatcccagaattgcctttcccttca ttccctcctagtgcaaggcatccacaagcctccacaaataaccagttacggaacccaaat ggtccaaatcatcccggtggacagcaaatgccagtttcctctccgaacttttctcccttc ttaaacactgcaaatcaattagctgcctcgcatcttggcccgcagtatggtggaaagttt gctcagggcacgcctgctgggcttccccttcataatcaaattccaagccaatggttgaag cagtctactttatatccaggggagcaatcaagcatgaccagtaatatgatgccccagcag tcacatcgccaaaatggtttcgcaacaccacatggggggctgcagctaccccagcaacct ggccaacagcaccccttgcgtccaccctatggccgtttgccagggttgcaatctcaactt attaatcaccatatgtctccaccctcgcagatgatgaacaattttgatatgcttgggttg gctgatttaagagatcaaaaggcaaaactaatgctgagaggcagacagggcatgcattac cctcaactaggctttgatatcagtagccagagaaatgttagcgcatggacaagatttaga tccaagtacatgtcaacagatgaattagagaatattcttagagcacagctggctgctacc catagcaatgatccttatgttgatgattattatcaccaagcttgtctggccaaaaagtct gctggtgcaaagttgaagcaccatttctgcccaaataatttgagggatggtagtgctcga agtcgtgctaatactgatccacatccttttctccaggttgatgctcttggaagagttgct ttctcttctattcgcaggccccgaccgcttcttgaagttgatccaccaaaatcatgtgct actggatgcattgaacagaaaatgtctgagaaacccctggagcaagagccaatgctagca gctagggtgactattgaggatggacttagtcttcttctcgatgttgatgatattgaccgg ttcctacagtttaaccagcttccagatggaggagatcagttgaaacgcaggcggcaggtt ctgcttgaggatttggcctcatcacttcagctagttgaccctcttggcaaaagtgtccac actgtgaatttggctgctaaagatgatgttgtcttcttgaggatcgtctcacttcccaag ggccggaaactgctagtacggtaccttcagcttcttttccctggaagtgaactgaccagg gtggtttgcatggctattttccgtcatctaaggttcttgtttggtgggattccaagtgat cacggtgcaaccgagactactgtgaaccttggaaggaccgtgtcgctttgtatttgtgaa atggagctcaaagcactcgctgcttgtcttgcatcagtggtttgttcagcagagcctcct ccgctccgtcctgttggaagccctgctggagatggggcatctgttgttctaaaatctatt cttgagagggcgactgagctcttaagagatccccatgcagctggcaagtgcagcatgcct aatagggcattctggcaggcctcgtttgatgcattttttgggttactcacgaaatactgt ttcagcaaatacgacactgtaatgcaatgtttcttgacacaaggcccaccggatgtggct gttagtggatctgatgcagccaaagctattagtagggagatgcctgttgaacttttgcgt gcgagtcttcctcacactagtgaacaacagagaaaggtcctgttagaatttgcacatagg tccatgcctgtgctaggtgttggtagccaaagtggggcaagtggtggtacatga

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