Solanum lycopersicum (tomato): 101253680
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Entry
101253680 CDS
T02665
Name
(RefSeq) uncharacterized WD repeat-containing protein C17D11.16
KO
K14791
periodic tryptophan protein 1
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sly03009
]
101253680
Ribosome biogenesis [BR:
sly03009
]
Eukaryotic type
90S particles
Other 90S particles
101253680
Pre-60S particles
Other pre-60S particles
101253680
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_RFWD3
WD40_WDHD1_1st
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
ANAPC4_WD40
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_WDR36-Utp21_2nd
WD_LRWD1
Beta-prop_DCAF12
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_2nd
NBCH_WD40
Beta-prop_HPS5
Beta-prop_WDR41
Beta-prop_Nup120_160
TMEM215
WDR90_beta-prop_4th
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
101253680
NCBI-ProteinID:
XP_004237060
LinkDB
All DBs
Position
4:complement(804842..811942)
Genome browser
AA seq
493 aa
AA seq
DB search
MIAAISWVPKGVAKSVPAEADPPSKEEIEQILKSGLLDKGEDSDDEEAEEDMNVDESKKN
EDDEVAIALAAADALGKATQVSSAGTDDIIDGLKELDMDNYDEEEEGIELFGSGLKDLYY
ASNDMDPYLKDKDNDSEEDDDMVIRPDDSVIVCASNEDDVSHLEIMILEDLSDGETNMYV
HHALILPAFPLCTAWLDCPIKGGERGNFIAVGSMEPAIEIWDIDIIDEVQPSVILGGIAD
IKRKGKKKSIKYKKDSHKDAVLGLSWNKEYRNILASASADHTVKVWDVTTEACNLTMNDH
TDKVQAVAWNPFAPQILLSGSFDHTVCLKDGRKPSHSGFKFSVGADVESLAWDPHSEHSF
VVSLENGTVTSFDIRAASSASTSETKPSFTIHAHDKAASSLCFNPLVPNLLATGSTDKMV
KLWDLTNNQPSCIASRNPKAGAVFTVSFSDDCPFFLAIGGSKGKLQLWDISSEDAVLKKY
GKYVAQKKQSPKS
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgatagcagctatttcatgggttcccaaaggggttgcaaagtctgtaccagctgaggct
gatccaccttcaaaggaggaaattgaacagattttgaagagtggtcttcttgataaaggt
gaagatagtgatgatgaggaagctgaagaagatatgaatgttgatgaatccaagaaaaat
gaggatgatgaagttgctattgcattagctgctgctgatgcacttggaaaggctacacaa
gtttcttctgcaggaactgatgacataatagatggtttaaaggaactggacatggataac
tatgatgaagaggaggagggaattgagctttttggttcaggactcaaagacttgtactac
gcaagtaatgacatggacccatatctcaaggataaggacaatgactctgaagaagatgat
gacatggtaataagacctgatgattctgttatagtttgtgcaagcaatgaggatgatgtc
agtcatctcgagattatgattttggaagatctatcagatggtgaaacaaacatgtatgtt
caccatgctcttattttacctgcatttcctctctgcacagcttggcttgattgccctatt
aaaggcggggagagaggtaacttcatagctgtgggctcaatggaaccagcaattgaaatt
tgggacattgacataatagatgaggtgcaaccatctgttattttaggtggcatcgctgat
ataaagagaaagggaaaaaagaaatctatcaaatacaaaaaggatagccacaaggatgca
gtacttggtctttcttggaacaaggaatataggaatatacttgctagtgctagtgctgat
cataccgtcaaggtttgggatgtgactaccgaagcctgtaatctcactatgaatgaccat
actgacaaggttcaagcagttgcatggaatccatttgctccacagattcttctgagcgga
tcattcgatcatacagtttgcttgaaggatgggaggaaaccctctcacagtggatttaag
ttttcagttggtgctgatgttgaaagcttggcttgggatccgcattcagagcattcattt
gtggtcagcttggagaacggtaccgtcactagttttgatatccgtgctgctagttctgct
tcgacttctgagacaaagccaagtttcaccatccatgctcatgataaagcagcgtcctcg
ttgtgcttcaatcctctagtcccaaatcttcttgcaactggctccacggacaagatggtt
aaattatgggatttgaccaacaatcaaccttcttgtattgcatctaggaatccgaaagct
ggagccgtcttcactgtatccttctcagacgattgccccttttttcttgctattggtggc
tctaaagggaagttgcagctatgggatatttcttctgaagatgccgtgttgaagaaatat
ggcaaatacgttgcacagaaaaagcagtcgcccaaatcataa
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