Solanum lycopersicum (tomato): 101253713
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Entry
101253713 CDS
T02665
Name
(RefSeq) YTH domain-containing protein ECT4
KO
K20102
YTH domain-containing family protein
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sly03019
]
101253713
Messenger RNA biogenesis [BR:
sly03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101253713
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
ANAPC_CDC26
Motif
Other DBs
NCBI-GeneID:
101253713
NCBI-ProteinID:
XP_004228948
UniProt:
A0A3Q7ED53
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Position
1:41349952..41354469
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AA seq
706 aa
AA seq
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MAAGAPPADQAADLLQNLSLDSRNKTLEIADTKKKPSGNPTDGANGQLQSADRSVTPVLP
EFMDPNLCYVPNSYASTAYYYGYDASANEWEDYARYTNPDGVEMPGVYGDNSSLIYHHAY
GYAPYSPYSPATSPVPTVGHDGQLYGSQQYHYPYFQPLPLTSTSNTSSAALPKGEIATSA
AAADQTSLSVDSAKGNSNVIVNGGVKGNTGHMPVRPAFQNSSLNANGSYGPGTLPGGAAS
GYQDPRLGFDGVRSPIPWIDGSMFTDGQARPVVNNSFTPSFSNGYAAPSTKNQNVHPHVM
GMHHPRSSSSVNTTNGYMNRMYPNKYYGQFGNSFNSGMGFGPNRYDTRATGRGGWMTVDN
RSKPRGRGNSFYGYGNENMDGLNELNRGPRGKGSKNQKSSTPVALAVKGQNIPLAVTKDA
EEDKPSLMPDREQYNHPDFPVTYADAKFFIIKSYSEDDVHKSIKYNVWASTPNGNKKLDA
AYQEAQQNSGGCPVFLFFSVNTSGQFVGVAEMVGPVDFNKNVEYWQQDKWVGCFPVKWHI
VKDVPNSLLKHITLENNENKPVTNSRDTQEVKVEQGLQVLKIFKDHISKQCILDDFEFYE
DRQKRIQDKKAKQQLFQKQSQVWEGKATTEEKNRDHSKVDLKPQKPTEVSACLNKENLPA
AAQTSTVEVKLTEIVPVTKTGDDVKDVKPVTVSEKKPVANGASNGC
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggctgctggtgctcctcctgctgatcaagctgcagatttgctgcagaatttgtcactg
gattctcggaataagactcttgaaattgcagatacaaaaaagaagccttctgggaaccct
acagatggggcaaacggtcagcttcagtcggctgatcggtctgtgacacctgtgttgcca
gaattcatggatccaaatttgtgctatgttcctaacagttatgcctcaacagcatactat
tatggatatgatgcttctgctaacgagtgggaggactatgcacgatatacgaatccggat
ggagttgagatgcctggagtttatggagacaacagttcacttatctatcatcatgcctat
ggttatgcaccctatagtccatattcacctgctacttcgcctgtccctactgtggggcat
gatggccaactttatggatcgcaacaatatcactatccgtatttccagcctctccccctg
accagtacttcaaacactagttcagctgccctgccaaaaggtgagattgccacttctgca
gcagctgctgaccaaacatcattatctgtggattctgctaaagggaactcaaatgtcatt
gtgaatggtggtgtaaagggaaatactgggcatatgcctgtgaggcctgcattccagaat
tcatccttaaatgctaatggctcttatggacctggcacattgccaggaggagctgcttca
ggttatcaggaccctagactgggttttgatggtgttcgttctcctattccatggattgat
gggtcaatgttcactgatgggcaagctaggccagtggtgaacaattcttttacgccatca
ttttcaaatggctatgctgctccatcaacaaagaatcagaatgttcatccacatgtaatg
ggcatgcaccacccaaggtcttcatctagtgtgaacacaactaatgggtatatgaatagg
atgtatcccaacaaatattatgggcagtttgggaactcattcaattctggcatggggttt
gggcctaaccggtatgatactcgcgctacaggtcgtggtgggtggatgacagttgataac
aggtctaaacccaggggtagaggaaatagtttctatggctatggcaatgaaaacatggat
ggtttaaatgagctcaacaggggaccgagaggtaaaggatccaagaatcagaagagttct
acaccagttgctctggcagtcaaggggcagaacatccctcttgctgtaaccaaagatgcc
gaggaagataaaccaagcctgatgcctgacagagaacaatacaaccatccagattttcca
gtgacatatgctgatgccaagttctttatcatcaagtcttacagtgaagacgatgtgcac
aaaagcatcaaatataatgtgtgggctagcacaccaaatggcaacaagaagcttgatgct
gcttaccaagaggctcaacaaaattctggaggctgcccagtttttcttttcttctcggta
aatacaagtgggcagtttgttggtgttgcagagatggtagggccagttgatttcaacaag
aatgtggagtattggcagcaagacaagtgggtcggctgttttcctgtcaagtggcacatt
gtgaaggatgtacccaatagcttgttgaaacacattacactggaaaacaacgagaacaag
cctgttacgaacagcagagatactcaggaggttaaagtggagcagggtctgcaagtgctc
aagatatttaaggatcatattagcaaacagtgtatccttgatgattttgagttctatgag
gatcgtcagaagagaattcaggataagaaggccaagcaacagctattccagaaacagtct
caggtatgggaaggtaaagctactactgaagagaagaacagagatcattcaaaggttgat
ctcaagccacaaaaacctacagaagtttcagcttgtttgaacaaagaaaatttaccggct
gctgcccagactagcactgtggaagtcaagcttaccgaaattgtaccagttacaaaaact
ggagatgatgtgaaggatgttaaaccggtcactgtatcagaaaagaaacctgtagcaaat
ggggcttctaatggatgctaa
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