Solanum lycopersicum (tomato): 101253831
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Entry
101253831 CDS
T02665
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101253831
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sly04121
]
101253831
Enzymes [BR:
sly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101253831
Ubiquitin system [BR:
sly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
101253831
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
FAIM1
DUF7567
Motif
Other DBs
NCBI-GeneID:
101253831
NCBI-ProteinID:
XP_004229988
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All DBs
Position
1:complement(82973457..82977110)
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AA seq
333 aa
AA seq
DB search
MEFDSIECVSSSDGIEEDEIPQLHPHIIRSQFSSSKTTTHKNNNGSSILCEGNNGGIAIH
PATSVHELLECPVCTNSMYPPIHQCHNGHTICSTCKARVHNRCPTCRQELGDIRCLALEK
VAESLELPCKFGSLGCPEIFPYYSKLKHEAACNFRPYNCPYAGSECAAVGDIPYLVTHLR
DDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFNCFGQYFCLHFEAFQLGMAPVYMAF
LRFMGDETDAQNYTYSLEVGGNGRKLIWEGTPRSIRDSHRKVRDSHDGLVIQRNMALFFS
GGDRKELKLRVTGRIWKEQQNPDEGACIPNLCS
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggagtttgatagcattgaatgtgtatcatcttctgatggtatagaggaagatgagatt
ccacaacttcatccacatatcattcgttctcagttttcgtcctcaaagacgacgacccac
aagaacaacaacggaagcagtatcttgtgtgaaggaaataatgggggaattgcaattcat
ccagcgactagcgttcatgagcttcttgaatgccctgtttgtaccaattctatgtaccct
ccaatccatcagtgtcataatgggcacactatctgttcaacatgtaaagccagggtacac
aaccgatgtcccacttgtagacaggagcttggtgatatcagatgtttagcattggaaaag
gtggctgaatcacttgagctaccttgtaaatttggctctcttggatgtcctgaaatattt
ccttattacagtaagctgaaacatgaggctgcctgtaattttagaccatacaactgcccg
tatgctgggtcagagtgtgcagctgttggggatattccttatttggttactcatttgagg
gatgatcacaaggtagacatgcactctggatgcacttttaaccatcgctatgtcaaatct
aatccccgagaagtggaaaatgctacgtggatgttaacagttttcaattgttttggtcag
tacttttgtctccatttcgaagcatttcagcttggaatggctcccgtttacatggcgttc
ctccgttttatgggagacgagacagatgcacaaaactacacctacagcctggaagtaggg
ggaaacggaaggaagcttatctgggagggtacaccccgaagcataagagacagtcatagg
aaagttagggatagccatgatggtctcgttatccaacgtaacatggcccttttcttctcc
ggaggagacagaaaggagctcaagctaagagtcactggaagaatatggaaggaacaacag
aatccagacgaaggagcttgcataccaaatctctgtagttaa
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